Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0840 |
Symbol | |
ID | 8724571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1016059 |
End bp | 1017276 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003385698 |
Protein GI | 284035768 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCTA CTTCCGAGTA CAACGTGGCT TCCCTTAAGC GGAGTCGATT AGCGACCCAG GCGATTTTTC TGGTCTGTGG GTTTGGCATT TCTACCTGGG CACCGATGGT CCCCTATACC CGCGACCGGC TAGGGCTTAC CGATGCCTAT ATCGGGCTGT TACTGCTCTG TCTGGGGGCG GGTGCCATTG TGATGATGCC CCTGACGGGT TGGCTCATCG GAAAACTCGG TTCCCGCCGG GTGATCCTGG GCGCTTCGCT GCTGATGGCC CTTAGCCTGC CCCTACTGCT GGTGATGCCA ACACCGGTCA GGATGGCCCT GATGCTGTTT ATCTTTGGGG CGGGAGTGGG CAGTGTCGAC GTAGCGATGA ACGCGCACGG GGTGCAGGTC CAGAACCTGG CGACCAAGCC CATCATGTCT TCGCTACACG GGCTGTTCAG CGTGGGCGGG CTTTGTGGGC CGCTGGCGAT TGGCCTGTCC ATCAAAGCAG GCCTGCTTCC ACTGGCAGCC GCCTGCCTGG TGTCGGCCTT CCTGCTGACG ATTGTGCTGA TCGCGTATCG CTATCTGTTG GAGGCAAGCG TTGAAAAAGA CACGGTCCGT CAGTTGACCG ATGCGGCAGC CGCCCAAACG ACCGGTCTGG TGGCCTGGCT AAACCCCGCT GTGTTGCGGC TTGGCTTTAT GTGCTTTGCC GTCTTTCTCT CGGAAGGGGC AGTGCTGGAC TGGAGTGCAA TCTATCTGCG GGATTACCGA CATGTGGAAG ACGCCCTGAC CGGCGTTGGG TATGCTTTCT TTTCGATTGC GATGGCGGGA ATGCGGCTGG TTGGGGATAG GCTTGTCGCC AACGTAAGCC GTAACGTGAT CGTGGTGGGC GGTTGCGGGC TTAGTGTAGC CGGCTTTTTA CTGATCATCG CTACCCCCTG GCTAGCCACC ACGTTGGCGG GTTTTGTCCT GGTCGGACTC GGAGCCGCCA ACATCGTTCC GGTTTTCTTT AGCGAAGCAG GAAGTCTGAA ACAGGTTTCG CCCACGGTCG CCATTTCCGC TATCACTACC CTGGGCTATG CGGGCCAGCT GGCAGGACCG GCTTTGCTGG GTTTTATCGC CCAGCAGACC ACGTTATCGG TGGCTTTGGG GTGTACGGCC AGTTTGTTAG CTTTGGTGGG CCTTAGCTAT TTTGTAAAGA AAAATCAACC GACTCATTCT CAACAGGATT ATGCTTAA
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Protein sequence | MHPTSEYNVA SLKRSRLATQ AIFLVCGFGI STWAPMVPYT RDRLGLTDAY IGLLLLCLGA GAIVMMPLTG WLIGKLGSRR VILGASLLMA LSLPLLLVMP TPVRMALMLF IFGAGVGSVD VAMNAHGVQV QNLATKPIMS SLHGLFSVGG LCGPLAIGLS IKAGLLPLAA ACLVSAFLLT IVLIAYRYLL EASVEKDTVR QLTDAAAAQT TGLVAWLNPA VLRLGFMCFA VFLSEGAVLD WSAIYLRDYR HVEDALTGVG YAFFSIAMAG MRLVGDRLVA NVSRNVIVVG GCGLSVAGFL LIIATPWLAT TLAGFVLVGL GAANIVPVFF SEAGSLKQVS PTVAISAITT LGYAGQLAGP ALLGFIAQQT TLSVALGCTA SLLALVGLSY FVKKNQPTHS QQDYA
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