Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0827 |
Symbol | |
ID | 8724558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1005514 |
End bp | 1006053 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003385688 |
Protein GI | 284035758 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.843783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.883408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGA ATTATAAACG CAAAAAAGAG CCTCTGGAAA GCCGTCAAGC CGTCCTGGAG GCAGCTTTTG AATTAATACC TGAGATAGGC CTGGATAAAC TGACGCTTGA TGCGGTGTCG AAAAAAGCCA AGTTGAGTAA AGGGGGATTG TTACACCATT TCCCCAAAAA GGACGCACTC ATTAATGCCC TGTTTGCTGA CAGCCTGCAA AAATTCTCGG ATACAATGAG CCGGGCGAAA CGAGATAACG AATCGTTTGC CATCACTTAC CTAAAAGCCA TTGTCAACGA TAAGCCCGAT CCGTTGCAAA AGCGCTCGAT GCATCTTCTT ATGCAGGCGG CTATTCACAA TGGTTCCTAT CGTGAGTTAT TAGCCCAGTG GTACCAAAAA AATGTGATGA GTGAAGCGGT CAACAACTCG CCTGCGGCAC TAACGGCCAT TTTGGTGGCT GATGGTATTT GGTACGCTAA TTTGTTTGGT GCCTATACGC TGACCCGGGA ACAAAAAAAT CAAATTATAG ACCTCATAAG CAACTTATAA
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Protein sequence | MNMNYKRKKE PLESRQAVLE AAFELIPEIG LDKLTLDAVS KKAKLSKGGL LHHFPKKDAL INALFADSLQ KFSDTMSRAK RDNESFAITY LKAIVNDKPD PLQKRSMHLL MQAAIHNGSY RELLAQWYQK NVMSEAVNNS PAALTAILVA DGIWYANLFG AYTLTREQKN QIIDLISNL
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