| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0816 |
|---|
| Symbol | |
|---|
| ID | 8724547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 989034 |
|---|
| End bp | 991283 |
|---|
| Gene Length | 2250 bp |
|---|
| Protein Length | 749 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF2309 |
|---|
| Protein accession | YP_003385678 |
|---|
| Protein GI | 284035748 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.512183 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAACAG CCGTCGTGGA TACGAACGTT TTAATCGAAG AAGACTATCA GCTTTTAAAA
CCATCCGAAG ACGTAAGCAC TGCCCGCATA GCTGGTCTGG TGGCGAAAAG TTTCAAACTA
ATAGCGCCTT TCTGGCCCCT GAAAAATCTG ATTGCGGTCA ATCCGCTGCA AGGCTTCGAG
GATTTACCTT TCGAGGAAGC CCTGCCCCTG GGCAGCGCCT ATTTTCAGCA GGCTTCTTTA
CCGCAGCCAA TGGAAGCCGT CAATCGTCAA ACCATCAAAT GGTTACAAGC GTATTTTGAC
GATGGTCAGG CAACCCTGCC TATGCCCTTG CGCCAGGAAG GGTTATATGC TGCCTGGCGA
CAGCTTGCCG TGCATGATGC CTGCTTACAT GAGAATGATG AGCAAAAGCA GGAATGGTTG
ACCACCCTGC CCGAAAATCC GGCGCAGGCC ATACAGTTAT ACCTACTGCA CACAGGTATT
GCCCCTTCTG AACACGAGCA ATTCCTAACC CTGCTGCTCA CCACGCTGCC GGGCTGGGCA
GCCTACATCC GGTACCGTAC CGACTGGGCG GGACTCGATG CCAACCATCG CCATCCGGTA
ACCCAGATCG ACTACCTGGC CATTCGGCTC ATCATTACCC AGGTGCTGTG GCCGGATGCG
AAGGCGTTAT TAAGCTGGCA CCAGGGGGCT GTGGAACAGG CTCGATCAAA GCCAGATGTG
CTGGCGAACA TTCAGCAGGC CGAAGACACG TACCGCCTGC CGCTACTTCA GCAACTGGCC
ACCCAACCGC TGACCGAAGC CCGCACGCCC GACGCTCAAC TTGTCTTCTG CATCGATGTT
CGGTCGGAGC CATTTCGACG AGCACTAGAG GCTACGGGCG ACTACCAGAC GTTGGGGTTT
GCTGGTTTCT TTGGTGTCCC GGTTCAGATC ACCGATACCG TAACGGGCGA AACACATGCC
TCCTGTCCGG TGCTCCTTTC GCCTAAACAT ACGGTTCACG AATCGCCTTG CTGTAGCCCC
GCCGAAGCGG ACCAGGATCG CACGGCCTAT GGTCGTCAAA AGAAGCTCAA GCAACTCTAT
CAATCCCTGA AATATAGTTT CACGACGCCC TTTGCGCTGG TCGAAAGTAT GGGACTGGCC
AGTGGTGCCT GGATGGGATT ACGCAGCCTG GCACCCGGCC TGGCATCCCG GCTCAAGCAC
AGCGTCAGCC AGTCGATCAG AAAACCGATG GCGGTAGCCT CATCGTTGGA AACGCTTCCG
CTTGCCGATC AGTGTGCCTA TGCCGAAGGG GCGTTGCGGG TAATGGGCCT TACTCATCAT
TTTGCGCCAC TGGTCGTTTT CTGCGGCCAT GGCAGCACGA CCCAGAACAA CGCCTATGCA
ACGGCACTTG ACTGCGGAGC CTGTGGCGGA CGACACGGAG CCCCAAACGC CCGTATTCTG
GCGGGCATTC TGAATAACCC TGAGGTCAGA ACTTATCTCG TTCAGCAAGG AATTGCGATA
CCTGATACCA CCCGGTTTAT CGCAGCTGAG CACAATACGA CCACCGATGA AGTTACCCTC
TATGGCGATG ACGCATCTGA AGCGTGTAAG AAGTTGACGC GGGATCTGGC CAAAGCGCAA
CAGGCCAACA GCCTTGAGCG ACTCAGGCAG ATGCAAAAAA ACGCGGATCA TAGCGGTGGG
GCACAGCAAA CCTGGCTGCG GTCGCAGGAC TGGGCTCAGG TGCGTCCTGA GTGGGGACTG
GCACGTAATG CGGCCTTTAT TGTCGGCCCG CGTCAGCTGA CGGCATCCCT TAATTTGCAA
GGGCGCTCTT TTCTACACTC ATACAATTAT ACACAGGACC CATCGGGCTC GTCGCTCACC
ACGATTCTGA CGGCTCCTAT GGTCGTCGCC GAGTGGATCA ATACGCAGTA CCTGTTTTCT
ACGCTGGACA ATGTGGCTTT TGGCGGGGGC AGCAAAATAA CGCAGAATAT CACCGGCAAG
ATCGGCATTA TGCAGGGGAA TGGCAGTGAC CTGATGACGG GTTTGCCTTT GCAATCGGTC
TACGCCAGCG ACGAGCTTGC CTATCATCAG CCTCAGCGCT TATTGACGGT TGTCTATGCC
CCCCGACCGC TGCTGGATGC TATTATTCAG GCGCAACCGG TATTACAAAA ACTGTTTGGA
AACGGATGGG TACAACTGGC CTGCATCGAG CCAACTGATC GCCAAACGTA TTTACTAACC
CGTGACCTGC TGTGGCAAAA GGCAAAGTAA
|
|---|
| Protein sequence | METAVVDTNV LIEEDYQLLK PSEDVSTARI AGLVAKSFKL IAPFWPLKNL IAVNPLQGFE
DLPFEEALPL GSAYFQQASL PQPMEAVNRQ TIKWLQAYFD DGQATLPMPL RQEGLYAAWR
QLAVHDACLH ENDEQKQEWL TTLPENPAQA IQLYLLHTGI APSEHEQFLT LLLTTLPGWA
AYIRYRTDWA GLDANHRHPV TQIDYLAIRL IITQVLWPDA KALLSWHQGA VEQARSKPDV
LANIQQAEDT YRLPLLQQLA TQPLTEARTP DAQLVFCIDV RSEPFRRALE ATGDYQTLGF
AGFFGVPVQI TDTVTGETHA SCPVLLSPKH TVHESPCCSP AEADQDRTAY GRQKKLKQLY
QSLKYSFTTP FALVESMGLA SGAWMGLRSL APGLASRLKH SVSQSIRKPM AVASSLETLP
LADQCAYAEG ALRVMGLTHH FAPLVVFCGH GSTTQNNAYA TALDCGACGG RHGAPNARIL
AGILNNPEVR TYLVQQGIAI PDTTRFIAAE HNTTTDEVTL YGDDASEACK KLTRDLAKAQ
QANSLERLRQ MQKNADHSGG AQQTWLRSQD WAQVRPEWGL ARNAAFIVGP RQLTASLNLQ
GRSFLHSYNY TQDPSGSSLT TILTAPMVVA EWINTQYLFS TLDNVAFGGG SKITQNITGK
IGIMQGNGSD LMTGLPLQSV YASDELAYHQ PQRLLTVVYA PRPLLDAIIQ AQPVLQKLFG
NGWVQLACIE PTDRQTYLLT RDLLWQKAK
|
|---|
| |