| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0813 |
|---|
| Symbol | |
|---|
| ID | 8724544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 986504 |
|---|
| End bp | 987226 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1080 |
|---|
| Protein accession | YP_003385675 |
|---|
| Protein GI | 284035745 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.3421 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TCGCTCTACT TACCGGCTTA TTGCTGACCT ATTCGCTTCA TCTGTTTGCC
CAAACCTCAT CGTCCACAAC GGCACCCCCC ATTACCCCAC CTAAAGGACA CCCGAACTCA
AGCGGTGCGG GTTGGAAACC GCTCTTCGCC AGTGACCTGT CTGATGCGGG CTTCCCAAAG
GGTATCTGGA GCTTTGATGA CGGGGGCGTT CTGACCGCTA CGGCCGACAA AGCCATCTGG
ACGGCCATTC CTTACGACGA TTTTGTGCTG GATCTGCTTT TTAAAACCGC CGATGGCACG
AATAGTGGCG TTGTAGTTCA TGCCAGCGAT ACAACCAACT GGATTCCCAA CTCAGTAGAG
ATTCAGATTG CTGACGATTA CGCCAAAAAA TGGGCCGATT CGCCCACAAA CTGGCAGTGT
GGCGCGTTTT TTGGGCATCA GGCCGCTGTT AAGCAGCAGG TCGTTAAAAA GCCCGACGAG
TGGAACCGGT ACACCATTAC CTGTCAGGGC AAGATGATCT ATGTGGTACT CAACAACCAG
TTGGTGAATA CCATCGACCT GTCGAAATTC ACATCAGCAA AGACCAATCC CGATGGTTCA
GAAGTGCCGT CCTGGCTCAG CAAAGCCCCC GCCGAACTAC CGCTTCGCGG CTACATCGGT
CTCCAGGGCA AACATGCCGG TGCGCCCATC TACTTTAGAA ATCTGAAGAT CAAGACTTTG
TAA
|
|---|
| Protein sequence | MKKLALLTGL LLTYSLHLFA QTSSSTTAPP ITPPKGHPNS SGAGWKPLFA SDLSDAGFPK
GIWSFDDGGV LTATADKAIW TAIPYDDFVL DLLFKTADGT NSGVVVHASD TTNWIPNSVE
IQIADDYAKK WADSPTNWQC GAFFGHQAAV KQQVVKKPDE WNRYTITCQG KMIYVVLNNQ
LVNTIDLSKF TSAKTNPDGS EVPSWLSKAP AELPLRGYIG LQGKHAGAPI YFRNLKIKTL
|
|---|
| |