| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0789 |
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| Symbol | |
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| ID | 8724519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 955288 |
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| End bp | 956013 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003385651 |
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| Protein GI | 284035721 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.559665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCGCAAC AAAATCAACC AACGCCCGAC CCCGGTCAGG TAATTTTAAT TGATAAGCCA
CTTACCTGGA CGTCGTTCGA CGTAGCTAAC AAGCTTAAAT ACGCCTGTAA GTTCAAGAAG
ATTGGTCATG CTGGTACGCT GGACCCACTT GCTACTGGCT TGCTTATTCT TTGTACTGGC
AAGATGACCA AGCAGATAGA TCAGTACCAG GCTCAGGAAA AGGAATATAC CGGAACTTTG
GTTCTGGGTA AAACCACTCC CTCCGTTGAT TTGGAAACAG CTTTCGACGC TGAATTCGAT
ACAACGGGTA TCACCCCTGA GCAAATCCAG GAAGCAGCCC GGCAGCTAAC GGGCGAAATT
CTGCAGGTGC CGCCTATCTA CTCCGCCGTT CGGGTAAATG GCGAGCGACT CTACGAAAAA
GCTCGTCGGG GCGAAACGGC CGACCGCGTT GAAGGAGGTA TCAAAGCGCG TCAGGTAACG
GTATCGGCTT TTGATGTCGA TACAGAACGA TTTCCGGAAA TCGATTTCCG TATCGTATGT
TCAAAAGGTA CTTATATTCG TAGTCTCGTA CGCGATTTGG GTTTGCTGCT GAACAATGGC
GCTTACATGA GCAGCCTGCG CAGAACACGA ATTGGCGAGT TTAGAGTAGA TGATGCCCCA
ACCCTCGACG CGTTTATTGC CGCGCACCGG GCGGTATCAT CAGAACCGTT ATCAACAAAC
GAATGA
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| Protein sequence | MSQQNQPTPD PGQVILIDKP LTWTSFDVAN KLKYACKFKK IGHAGTLDPL ATGLLILCTG
KMTKQIDQYQ AQEKEYTGTL VLGKTTPSVD LETAFDAEFD TTGITPEQIQ EAARQLTGEI
LQVPPIYSAV RVNGERLYEK ARRGETADRV EGGIKARQVT VSAFDVDTER FPEIDFRIVC
SKGTYIRSLV RDLGLLLNNG AYMSSLRRTR IGEFRVDDAP TLDAFIAAHR AVSSEPLSTN
E
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