Gene Slin_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0782 
Symbol 
ID8724512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp948054 
End bp949349 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385644 
Protein GI284035714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTG GTTCAGACTA CTTTACCGAA CTCCGCTCAG AGGAGGTGCA GGAACTTATG 
GCACGTTCGC CAGCCTGGCT ACTTCGCTGG GGCATTCTGG TCGTGCTGTT GGTTGTCGCT
CTGATCTTTT CAGGTGCCTG GGTGGTACAC TACCCTGATC TGGTACACGC GTCGTTTAAA
CTAACATCGA CCAACGCACC CAAAGCCGTT TTAACCCATA CCGATGGCAA GCTGGTTCGG
TTGCTGGTGC AGGATGGGCA GCTTGTTGGG GCGGGCGATC AGGTAGCGTA CCTCGAAAGC
ACAGCCAATC ATGCCGATAT TGTACGACTC TCTCAGGAAT TGGCTAAGGC TTGGGGGTTG
GCCAGTCGGG GCCACCTGGA AGCGTTAAAC CAGTTGACGT TATCGAACTA TAGCCAACTC
GGTGAACTGC AAAATGCCTA TCAGACCTTT GAACAGGCCC ATATTCAGTT GAGGGCTTAT
CTGGCCAATG GATTTTATAG CCAGAAAAAG AAGTTGCTTC AACAGGAAAT CGTTGATCTA
ACTTTATTGG CCGACAACTT ACGGACACAG CACCAGATTC AGGCACGCGA TATGGCACTG
GCGCAACAGG ATTACGATAT TCAGGCTCAA CTGGCCCGTG ATAAGGTTAT TGCCCCGCTT
GAGTTGACCC GCGAAGAGAG TAAAAATAAT GCCCGAAAAC TGCCGTTTCA GCAAACGGCG
TCGGCCTTGA TCAGTAACCT CACGGCCCAA CGGGCTAAAC AGAAAGAAAT TCTGGAGTTA
GACAAGCAGG TAGCCGAAGA GCGCGACAAG TTTCTACAGG CACTAAACAC GCTGCAAAGT
GCTGCCGATG CCTGGAAACA CAAATACATA GTAACGGCTC CGGTGAGTGG ACGCCTTTCG
TTTCAGGGAA TGTTACAGGA AAATCAGTCT GTTTCGCTTA ATCAGGAGCT ATTCTACGTA
TCTCCGCTGA GCACCCACTA CTACGGCGAA CTACGTATTC CACAGCACAA TTCAGGAAAA
GTGGTGGTTG GGCAATCGGT ATTGATAAAA TTTAGCGGCT ACCCCTATCA GGAGTTTGGG
GCGGTACGGG GCCGCATTAC CAAAATTGCC GATGTATCGC TTAAAGACAG CGTCTTTCTG
GCCAGAGTTG CGTTGCCAAC CAGGCTGCAA ACGACCTATG GGAAACAATT AGCGTATAAA
ACCGGTATGT CGGCCTCGGC AGAAATCATT ACTGAAGACA GCCGGCTACT CGAAAAACTA
TTCTACCAGC TTCGGAAGGT GGGCAACGGG CAATAA
 
Protein sequence
MNPGSDYFTE LRSEEVQELM ARSPAWLLRW GILVVLLVVA LIFSGAWVVH YPDLVHASFK 
LTSTNAPKAV LTHTDGKLVR LLVQDGQLVG AGDQVAYLES TANHADIVRL SQELAKAWGL
ASRGHLEALN QLTLSNYSQL GELQNAYQTF EQAHIQLRAY LANGFYSQKK KLLQQEIVDL
TLLADNLRTQ HQIQARDMAL AQQDYDIQAQ LARDKVIAPL ELTREESKNN ARKLPFQQTA
SALISNLTAQ RAKQKEILEL DKQVAEERDK FLQALNTLQS AADAWKHKYI VTAPVSGRLS
FQGMLQENQS VSLNQELFYV SPLSTHYYGE LRIPQHNSGK VVVGQSVLIK FSGYPYQEFG
AVRGRITKIA DVSLKDSVFL ARVALPTRLQ TTYGKQLAYK TGMSASAEII TEDSRLLEKL
FYQLRKVGNG Q