| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0773 |
|---|
| Symbol | |
|---|
| ID | 8724503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 938538 |
|---|
| End bp | 939053 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | peptidase C39 bacteriocin processing |
|---|
| Protein accession | YP_003385635 |
|---|
| Protein GI | 284035705 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTCT TCGATACATT TTTTACGCCA ACAGACGAGA ATGCAAGTGC TTCGCTTTAC
GCACTCCTGA AAAGATTACG GGTTAAGGTA ACGCGGGCAA CGGTGCGGGA GTCGCTGGAG
CAACACCCTG ACTTCCCTAG CTTACTGAGC CTGAGTGATG TGCTCAATGA CTGGCAGGTT
GAGAGTATGG GCTTACAACT CAACACCGTC GAACAACTCC GCGAACTTAC TCTGCCGTTT
ATAGCTCATC TGCGAAAAAA CAATGGCTGG TATGTGCTGG TAACAGCCCT GCAAGGTGAT
ACAATTACCT ATACTGATAA TGAACAGGGA CGAAGGGCTG AATCACTCAC GGATTTTGAA
AAGAACTGGT CGGGAGTCGT ATTGCTGGCA GAATACCGCC CAGCAGAGTT CGACCCTGCC
GAGAAGAATC AACAAGCTGG TGAAGTGGAT TATGCCGAAA AGCATAAACT GGAACTACTG
GAAAATCTGC GTGGCCCGTT TGTACTGGCT GGCTAG
|
|---|
| Protein sequence | MAFFDTFFTP TDENASASLY ALLKRLRVKV TRATVRESLE QHPDFPSLLS LSDVLNDWQV
ESMGLQLNTV EQLRELTLPF IAHLRKNNGW YVLVTALQGD TITYTDNEQG RRAESLTDFE
KNWSGVVLLA EYRPAEFDPA EKNQQAGEVD YAEKHKLELL ENLRGPFVLA G
|
|---|
| |