Gene Slin_0733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0733 
Symbol 
ID8724463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp888127 
End bp889395 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content51% 
IMG OID 
Productnatural resistance-associated macrophage protein 
Protein accessionYP_003385595 
Protein GI284035665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACG ATGAATTGTA CAAAGTTTTT TCTACATTCA TCGTTCATCA TTCACCATTT 
TTAAAAGTGC CTAAAGCTCT ATCTTTCCGC TCCGGTCTTG GGAGCGTGTT GTTCTGGTCA
GTTATTTCGG CCGCGTTTAT TGGTCCCGGC ACCGTAACAA CCTGCTCAAT GGCGGGTTCA
CGCTTCGGTC TCGATTTGCT CTGGACTCTT ACATTCTCTA CTATTGGCAC CATCGTTTTG
CAGGAAGCAG CCGCCCGGGT TACCATCGCT TCGGGGCTTA CTCTGGGTGA ATTACTGACC
AAAGTATATG GGTTACGGGT CCGATGGCTA CTCGTCATTC TGTTTGGTGC TGTTGCCGTA
GGCTGCGCTG CCTATCAGGC TGGCAACATT CTCGGGGCCG TCTCTGGTTT ATCGCTGCTT
ACCGCCGATC ATGTAACGGC CCTCAACCCC CAGTTACTAA CCATATTGCT GGGTCTTATC
TGTATAGGTT TGCTCTGGCA GGGGTCTACC CGGCTTATTG CCAACTTTCT GGGATTAGTC
GTTTTCATAA TGGGTGTTGC TTTTGCCTAC GTAGCGGCCA ACGCATCGCC CACTGCTGCC
GAACTCACAA CCGCACTTGT CGTTCCCTCA CTCCCGCCCA ACGCTACCGT GCTGGCTATT
GGCCTGATTG GTACTACCAT CGTACCCTAT AACCTCTTTC TTGGCTCGGG CATCGGCCAA
ACACAGTCAT TATCCGAAAT GCGTTGGGGT ATTGGTATTG CTGTGCTTAT TGGCGGGTTT
ATTTCAATGG CCATTCTGGT GTCGGGCACG CTGGTAACGG GCGATTTCTC GTTTCAGAAC
GTTTCCCAGA CCCTTTCCAG TCGCCTGGGC AATTGGGCAG GGGGTTTATT TGCTTTCGGG
CTTTTCGCAG CCGGTTTTAC ATCGGCCCTG ACCGCCCCGT TGGCCGCTGC GATAACCGCG
AAAAGCCTGC TTGGCTGGTC CGAAAACTCT CTGGCTTATA AGGCGGTATG GCTTACAGTT
ATGGTGGTGG GGCTGACGTT CGGGTTGTTA GGTATCAAAC CCATACCTGT TATTGTGCTC
GCACAGGCTG CAAATGGGCT GTTACTCCCG GTAGTAACGG TATTTTTATT CATTGCCATC
AATAAAAAAA CCATTATTCC GGAAGCGTAT CGGAATCGAC TGTGGCAAAA CGCACTGATG
CTTATTATTG TTAGTGTTAC GGCTTTTCTC GGCCTTAGAA ATGTGTGGCT GGCACTGATG
AATAACTAG
 
Protein sequence
MMNDELYKVF STFIVHHSPF LKVPKALSFR SGLGSVLFWS VISAAFIGPG TVTTCSMAGS 
RFGLDLLWTL TFSTIGTIVL QEAAARVTIA SGLTLGELLT KVYGLRVRWL LVILFGAVAV
GCAAYQAGNI LGAVSGLSLL TADHVTALNP QLLTILLGLI CIGLLWQGST RLIANFLGLV
VFIMGVAFAY VAANASPTAA ELTTALVVPS LPPNATVLAI GLIGTTIVPY NLFLGSGIGQ
TQSLSEMRWG IGIAVLIGGF ISMAILVSGT LVTGDFSFQN VSQTLSSRLG NWAGGLFAFG
LFAAGFTSAL TAPLAAAITA KSLLGWSENS LAYKAVWLTV MVVGLTFGLL GIKPIPVIVL
AQAANGLLLP VVTVFLFIAI NKKTIIPEAY RNRLWQNALM LIIVSVTAFL GLRNVWLALM
NN