Gene Slin_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0718 
Symbol 
ID8724448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp873207 
End bp874118 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385580 
Protein GI284035650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0882168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCC CCGTTGTACT TTTTGCGTTC AAACGTCCTC ACGAACTGAA ACAAACGATT 
GCGGCTCTGT GCGCCAACAG ACTCGCTTCT GAAACAGATT TGTATGTTTT TGTCGACGGC
CCCCGGCGTA TCGATGAAGT GGCAAAGGTT AAGGCCGTGC GTACGGTAGT TGACAGCATT
ACCGGGTTCA GATCAGTACA GCGGGTTTAT AGCGAAACCA ACAACGGGTG TGCCAACTCC
ATAATATCGG GTGTAACGGA CGTTTTAACG CATCATCCGG CAGTGATTGT TCTTGAAGAT
GATATTGTGA CCACACCTAA TTTTCTGGAG TTTATGAACC AGAGTCTGGC GCAATATGCT
GACAGCACCG ATGTATTTTC CGTAGGCGGA TACACGTTTC CGTTTAAACG CCCGGCCGGG
TATACGGCAG ATGGCTACTT ATTTCAGCGG ACCTGCGCGT GGGGATGGGC AATTTGGGCA
GATCGCTGGC AACAGGTCGA TTGGGAACTG GCTGACTTTG AGAAGTTCAT GGGCAATTCG
ACCGCCCGTA AACAGTTCAA TGCCGGTGGG AGCGATCGGG TACGAATGTT GAGCCGGGCA
AAGAACCGGG CTATAGATGC CTGGGATATT CGGCTATGCT ATACTGAATT TAAGGTTGGC
GGGTACACCA TTTACCCAAC TGTCTCCAAA ACGGTCAACA TTGGCGTTGA CTCGCCCGAT
TCAACCACGG AGATTGTATA TGACCGCTAT AAACCCATTC TGGATGATGG GCATCAGCAA
CAGTTTAACC TTCCTCAATT AATACAGGCG CATCCAGACT ATAGCCGTCA GTTTCGCTGG
AAGTTCAGCA TTCCAGTTCG GTTGTGGAAT AAGCTACTTA CCTACACTAC ACTGGTTCGC
CGACTTTTTT AA
 
Protein sequence
MPAPVVLFAF KRPHELKQTI AALCANRLAS ETDLYVFVDG PRRIDEVAKV KAVRTVVDSI 
TGFRSVQRVY SETNNGCANS IISGVTDVLT HHPAVIVLED DIVTTPNFLE FMNQSLAQYA
DSTDVFSVGG YTFPFKRPAG YTADGYLFQR TCAWGWAIWA DRWQQVDWEL ADFEKFMGNS
TARKQFNAGG SDRVRMLSRA KNRAIDAWDI RLCYTEFKVG GYTIYPTVSK TVNIGVDSPD
STTEIVYDRY KPILDDGHQQ QFNLPQLIQA HPDYSRQFRW KFSIPVRLWN KLLTYTTLVR
RLF