Gene Slin_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0716 
Symbol 
ID8724446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp871015 
End bp872031 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385578 
Protein GI284035648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.112305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAT CTCTAAACCA GCTATTAATC TTTCTGAGTT GCTCTATCGG ACAGGCCATT 
GCACAAAGTC AAATAATAAC TCCTGATAAT CAAGTTGTTA GCTTTCAGTC GGCCAATGGT
ACCACTAATC TGTTTATTGG TCAGAGTACC AGTGCTGTAA TAGGTGGGAC GTTTAATACC
TTTATGGGAA GCCAGGCTGG CCAGGGTAAT ACAACGGGTT CTTACAATAC ATACTTCGGT
TACAAAGCGG GCTTTCCCAA CACCTCAGGT AGTCATAATA CATTTGTTGG TTATGAAGCC
GGGAAGCTGA ATATTGACGG GGACGATAAT GTTTTTATCG GGTATAATGC CGGTCAGCAC
AATCAGCGTG GTCGTCGTAA TTTAATTATT GGGCCTAACG CGGGCTTTGA TTTTACCGAT
GGTGAAGACA ATACCTTTCT AGGAGCTAAT GCCATAGGGG CGGGGGCTAG CTTATCCAAT
GCAACAGCCA TTGGTGCCAA TGCTCGTGTG TTGAGTAGCA ATGCCATGGT ACTCGGAAAT
AACGTAAATG TTGGTATTGG GACCTCGACT CCTCAAAATC GGCTTGAGTT GACGGCAGGT
ATAGATGGGC GAAGCGGTTT ACGCTTAACC AACCTTACGG CCGACTCGCC CACCTCAGGT
GCCGCAACCA CTAAGTTTCT GACAGTAAAT AATCAGGGTG ATGTGACCTT ATCAGGCCAT
CTGTCGGCGT TGGCCATGCA AGTCAAGCCA GTGTCAGAGC GTCAGTGGGC CGATTATGTG
TTTGCGCCAG ATTACCGGCT TCGGTCATTA CCTGAGACGG AGAAGTATAT TCAACAGTAC
AACCATTTGC CAGACGTACC GAGCGCCGGT GAACTGGTCA AAGACGGGAT TGACCTGACA
ACCCTTCTGG CTATTCTAGT GAAAAAGAAT GAAGAGCTAA CACTCCATGT TATTGAGCAG
CAAAAGCGAA TAGAGCGTCT GGAGGCCCAA CAGCGAAAGA GGGTAAAAAC TAAGTAA
 
Protein sequence
MKLSLNQLLI FLSCSIGQAI AQSQIITPDN QVVSFQSANG TTNLFIGQST SAVIGGTFNT 
FMGSQAGQGN TTGSYNTYFG YKAGFPNTSG SHNTFVGYEA GKLNIDGDDN VFIGYNAGQH
NQRGRRNLII GPNAGFDFTD GEDNTFLGAN AIGAGASLSN ATAIGANARV LSSNAMVLGN
NVNVGIGTST PQNRLELTAG IDGRSGLRLT NLTADSPTSG AATTKFLTVN NQGDVTLSGH
LSALAMQVKP VSERQWADYV FAPDYRLRSL PETEKYIQQY NHLPDVPSAG ELVKDGIDLT
TLLAILVKKN EELTLHVIEQ QKRIERLEAQ QRKRVKTK