| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0670 |
|---|
| Symbol | |
|---|
| ID | 8724399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 837419 |
|---|
| End bp | 838042 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_003385532 |
|---|
| Protein GI | 284035602 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.160252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAC GCTGGTCTCG GGAAATTCTG CGTTCCGTAC TGCTGAGTGC CTGTTTATTG
TCGCTGCTTA CAGCCTGTAA TGCACTCCGT TCCTCTGGTC CATCCGTTAG TCGTCGTCCA
TCCCCATCGC GTTCCGTTGC CAGTCGAACG CCAACGGGTA GAACACCGTC TCGTCCCCCT
GCCGTACCGG CTAAATCGGT TGGTAAGGTC GTTGATAGTC GTACCTACGA AAGCCGATAT
GTACCCGAAG TGGTTAAGAT TGCCCGGACG TATACGGGAA CGCCTTATCG CTCGGGAGGA
AACACGACGG ATGGCATTGA CTGCTCCGGG CTTGTGTATG CTGTTTTTAA TACTGTTGGA
TTAAAAATGC CCCGCATTTC CTGGCAGCAA TCTGAAGTGG GCCATGAAGT AGAAGTTGAT
GAGATCTTAC CGGGCGATTT AATTTTCTTT GTTCCCGATA AAGGTCAGGC GGGCTATGTC
TCGCATACGG GTATTGTGAC TGAAGTAAAT GGTAACCAGA ATATCCGGTT TATTCATGCG
TCCTCGTCGC GGGGCGTTCG GGAGGATAAT CTTTATGCTG ATTATTTCAA GGGACGATTT
GTAAAAGCAC TACGTCCATT TTAA
|
|---|
| Protein sequence | MQQRWSREIL RSVLLSACLL SLLTACNALR SSGPSVSRRP SPSRSVASRT PTGRTPSRPP
AVPAKSVGKV VDSRTYESRY VPEVVKIART YTGTPYRSGG NTTDGIDCSG LVYAVFNTVG
LKMPRISWQQ SEVGHEVEVD EILPGDLIFF VPDKGQAGYV SHTGIVTEVN GNQNIRFIHA
SSSRGVREDN LYADYFKGRF VKALRPF
|
|---|
| |