Gene Slin_0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0660 
Symbol 
ID8724389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp827101 
End bp827772 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385522 
Protein GI284035592 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.213475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAT ACAAACAAAA GACAGCCCGG CTTCTCATAG TCGGGCTTTT TATCAGCCTG 
GGCGTGCACG CCCAGAAGAT TGAGATCGGG GCTGGGCTGG GCGGTATGCT CTACAAAGGC
GATGTGTCGC CAGCCCTGAA CCCCCGCTTT TACAGACCTG CAGCAAGCGT ATTTTTTCGA
TATAATGCCA CTCGTTCATT TTCCATCCGT GGTAGTGGAT TTATTGGCGG GCTTCGTGGT
GACGACCAGG CTAGCCGTGA CCCGTTCCAA CAGGCGCGTA ATTACTCATT CCGCACAAAT
CTGAGTGCCG TAGAAGTTGA TTTCGAGTAT AATTTTCTGA ACTACAAACC ACTTCCCAAA
GCAAAAAACT GGACTCCGTA TATTTTTGGA GGCATAGGGT TGTCCCGCTT CAACAATGCT
GTAATCAAGG TAGGTGGGGT AGTAACATAT CCATTGGGTA TTGGCGTTAA ATACGAAATT
AAGCGGCCCT GGAGTGTAGG GGTTGAGTTT GGGACGCGTT TTATGCGCAA CGACTACCTG
GATGGCCTGG GAGACGCTAC GTTTGGGAAT GCCTTAACCA AAGTGGCGCA GGGCAATCCT
GCGCTCAAGG ATAGCTATAC GTATACCGCC CTTACTCTGA GCTATACATT TTATAAAATT
GTATGCCCCT AA
 
Protein sequence
MNQYKQKTAR LLIVGLFISL GVHAQKIEIG AGLGGMLYKG DVSPALNPRF YRPAASVFFR 
YNATRSFSIR GSGFIGGLRG DDQASRDPFQ QARNYSFRTN LSAVEVDFEY NFLNYKPLPK
AKNWTPYIFG GIGLSRFNNA VIKVGGVVTY PLGIGVKYEI KRPWSVGVEF GTRFMRNDYL
DGLGDATFGN ALTKVAQGNP ALKDSYTYTA LTLSYTFYKI VCP