Gene Slin_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0630 
Symbol 
ID8724359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp791161 
End bp791775 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385492 
Protein GI284035562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.313929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.063756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGG TTTTTCATCC GTTGCTGATG CCGACGCTGC TGTTTGCGCT GTTGCTGTTT 
CGGGTACCTG CCGTACTGGG GCTGGATGCA TTTTCGGTCT CCCTCCGACT CAGCCTGCTG
ATCCTGATTT TTGTCGGCAC CTTCATGACC CCTACCCTGC TGATCTATTA CCTGTTCCGC
ACGGGCTACG TTAAAAATCT GAAGATGACT ACCTTGTCCG ACCGGCGGTT ACCTTACTTC
CTGACGGCTC TGGTTTACAC GATAACGGCT TACCTGTTCA CCTACCAGAT GCAGGGCCTG
TCGAGCCTGG CACCCGAAGT TGGCACCCTC ATTGCCAGTA TTGCCGTTTC TATTCTGCTG
GTTGGCCTCA TCAGTCTATC CTGGCAAATC AGTGCGCATT GCGTAGGTAT TGCGGGGGTT
GTTGGCGTTA TTGGCGGCCT TATGCTTAAA TTCAGCATCA CCGACCTGTT CTTCCCGCTG
CTCCTGCTGG TTATGCTGAC GGGTTTTGTA GCCAGCGCCC GGCTCCGGCT CAACGCCCAC
AACCCCGCCC AGATTCTGGC CGGTCTGGCA CTTGGGCTGA CGGTCAGTCT GCTGACGGTG
GTTTGGCTCA TCTAG
 
Protein sequence
MSAVFHPLLM PTLLFALLLF RVPAVLGLDA FSVSLRLSLL ILIFVGTFMT PTLLIYYLFR 
TGYVKNLKMT TLSDRRLPYF LTALVYTITA YLFTYQMQGL SSLAPEVGTL IASIAVSILL
VGLISLSWQI SAHCVGIAGV VGVIGGLMLK FSITDLFFPL LLLVMLTGFV ASARLRLNAH
NPAQILAGLA LGLTVSLLTV VWLI