Gene Slin_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0602 
Symbol 
ID8724330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp748162 
End bp749523 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385465 
Protein GI284035535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACA GAATAGGGGT TGTCTGGCTC TTGTGGCTGG CCGTATTTAT CGACATCCCG 
GCTTCCGCTC AGGGCTGGAA AGCGGGAACG GCCCGCGTGA TCATCACGCC CAAAGAACCC
CTCTGGCAGG CGGGTTACGC GTCCCGTACG CACCCCGCCG ATGGCAAACT ACACGACTTA
TGGGCCAAAG CGCTGGCGCT GGAAGACAGT ACGGGCAAGC GGGCCGTGCT GGTCACGACC
GATATGCTGG GTTTCCCAAA AGCCATGTCC GACCGGATTC GGGCCCGGCT GAACAGCCAG
TTTGGTCTAT CGAAAGCGCA GGTCATTCTC AATAGTTCGC ACACTCATTC GGGGCCCGTG
CTGGATAATG CCCTTCAGGA TATTTATCCG CTCGATGCGA AGGAGCAGGC GAAAATTGAT
CGATACTCCC GATGGCTGGA AAGTCAGATT GTGACCCTGG CGGGTCAGGC TTTAACGAAA
CTGGAGCCGG TCAAACTATT CGCTCAAAAT GGCGTAACAC GTTTTCAGGT AAACCGCCGG
AACAACAAGG AAGGCGCACT TGTGGGGCAA AGCGAGTTAA AAGGTCCCAA CGATTATGCC
GTGCCCGTTA TTAAGCTGGT CGATGCCGCT GGTACGCTTA AGGCCATCGT GTTTGGGTAT
GCCTGCCACC CTACCGTACT GGATTTATAC CAATGGTCGG GCGACTACGC CGGTTTTGCC
CAACTGGAGC TGGAGAAAGC GCATCCTGGC GTAACGGCCC TGTTTTTTCA GGGCGCAGCC
GGCGATCAGA ACCCGCTGCC CCGACGAACC ATTCCGCTGG CTCGTCAGTA TGGGCGCGAA
CTGGCCGCTG CCGTCGACCG TGTACTCGAC GAATCCATGC GAAACCTGCC CCCGCAGCTT
CGCACGGCTT ATTCGGAAAT TGAACTACCC CTCTCGGCTC CGCCTTCCGA AGCGGAACTG
ACCAAAACCA GTCAGGACGG CGAAAGCTAC ATGAAACGCT GGGCAACGCG TCTGCTGGCC
GAAAAGAAGC AGGGCAAACC CTTTCTAACC AGCTACCCGT ACCCGTTACA GATCTGGCAG
TTGGGCAACC AGCCTATCCT AAGCTTTGGT GGCGAACTCG TAGTGCAGTA CGCCCTCGAC
TGTAAAAAAC GATTCGGGCA GGACATCTTC GTGATGGGCT ATGCCAACGA TGTGATGGGT
TACATCCCGT CGGTTACGAT TTTACAGGAG GGCGGCTACG AAGGGGCTAC CTCGCAGATG
GTGTACGGCC TGCCAAGTAG CTGGGCACCG GAAGTTCCCA ACCTAATCGA CCGGGAAATA
AACCGGCTGG CCGAACAGAT AGGGCTGACT ACGTTGAAGT AA
 
Protein sequence
MSNRIGVVWL LWLAVFIDIP ASAQGWKAGT ARVIITPKEP LWQAGYASRT HPADGKLHDL 
WAKALALEDS TGKRAVLVTT DMLGFPKAMS DRIRARLNSQ FGLSKAQVIL NSSHTHSGPV
LDNALQDIYP LDAKEQAKID RYSRWLESQI VTLAGQALTK LEPVKLFAQN GVTRFQVNRR
NNKEGALVGQ SELKGPNDYA VPVIKLVDAA GTLKAIVFGY ACHPTVLDLY QWSGDYAGFA
QLELEKAHPG VTALFFQGAA GDQNPLPRRT IPLARQYGRE LAAAVDRVLD ESMRNLPPQL
RTAYSEIELP LSAPPSEAEL TKTSQDGESY MKRWATRLLA EKKQGKPFLT SYPYPLQIWQ
LGNQPILSFG GELVVQYALD CKKRFGQDIF VMGYANDVMG YIPSVTILQE GGYEGATSQM
VYGLPSSWAP EVPNLIDREI NRLAEQIGLT TLK