| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0589 |
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| Symbol | |
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| ID | 8724317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 723328 |
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| End bp | 729093 |
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| Gene Length | 5766 bp |
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| Protein Length | 1921 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | hypothetical protein |
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| Protein accession | YP_003385452 |
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| Protein GI | 284035522 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTT CTATTTATAA ATTACAGCGG GAGACAAAAC GGACTGCTGA CGATTCCTGG
GAATGGTCTA TCTGTGTTGA GGCCGGTAAA GCAGCCCTCA ATAAGATTGA TTCGGTAGTG
TATGAAATAC CTTTTCCTGA AAATCCAGTA CGGGAAGTAT ACGACTCCGA GTCGCGGTTC
AGGCTTTCGG ATGTTTACAC CGCTGCTTTT ACGGCCAACG TCGAAATCAG ACTGAAAGAC
GGGACTACTG AAAACACTAA AATCAACATA GACGTAAATG AAGCTCCCCT TACCGTAAAT
GCACCCCGGA AGCAAACCGA GTCTGAGGCT GTAAAGCCTA CCTCCGGTTT TTCGATCCAA
TCCATTGTGT TACAGGGCGA CTTGGACGAA AGCTTTGATT CGGAAGAAAG CGAAACCTTA
ACGCTCGACG CTGTCTATAC GGTACGGCCC GCCACGCGCG CTGGCAATAC CCCACGCCAT
GTAGTACCAG TGGTTGATGA GGCTGGTCAC CCCAAAGTCA TCGAGTTTAC GTTCAGGAAA
GTCAGTGGTA GCGAGGCAGA TGCAGAAATC GACACCGACA CTGTTTGGAT TGGCGATTTA
ACGACTATTG ATGATATTTT CCCCGGTACA TCGACTCAGG TCAGGGGTAT TGAGAATGGC
CAGGGAAGGA CCGTTGTTAT TCCCGCAGAG TTATCGGTTG GGGAGTCGAA CCGTAGCGGT
ATGCTACCCA GAATTGCACT CAAGCTAGTT CGGATCTTTA CCAGAAGAGA AAAAGTTGAA
GATAGTCGGC CTCAGATAGA GAAAGCGGTT CGGGATTTGG CAATCCGGCT GGAAGACCAG
CAACTGGACA ATAGAACGGG TTTGTTTCGG CTTACGGAGC AGTTCGAACT GGAGGACATA
AAACTGCAAA ACGGGGGCAA CTACCTCCTG TTCATTCACG GTACCATGTC TTCCGCCAAG
GGGGCGTTCG ATAAGTTAAA GGACACACCG GTATGGACAT TTATCAACCA AACGTACGAG
AATAGGGTAC TGGCTTTTCA GCACAAAACC CTCACTCAGA GCCCGCTGGA GAATGTACTG
GAGTTGGTAA AAGAGCTACC GAAGACGGCT ACGCTGACCC TCATCAGCCA TTCGCGTGGC
GGTTTGGTGG GCGATATCCT CAACCGATTC TGTCTGAGCG ATACGTCGAA GCGTGGCTTT
TCCCTTAACG AGAAAAATTA CCTGCGCCGA CAGAATCGCG ACAACGACCT GCGGCTGATC
GAAGAAATTG ATGCTGCGAT TTCGAACAAA AATATTACCA TTGCCAAATT TATCCGGGTG
GCTTCTACCG CCAGTGGGAC AACGCTGTTA TCTCACCGGC TCGACACGTT TTTCAATGTT
ATCGCCAATG TCATCGGTCT GGCTATTCTT CCCGCTTTCG GCCTGGTTCG GGATTTAATC
GCCACCGTAC TGGAAAGTCG ACAGGATGTA TCTATTCTGC CGGGCCTGGA AGTGCAGAGC
CCCGGTTCGC CCTTTAACCA GATGCTCAAC AATGCTAATC CTGATGTTCT CATCGATACG
CCCCTCTTCA TTATCTCGGG CGATGCCAAA CTAAGTTTGC GCTGGCAGGC TATTAAAGTT
GCGCTCACAA ATCTGTTTTT CCTGGGCGAT AATGATTTTG TGGTAGATAC CCGCTCCATG
TACAACGGCA TCCGACGGGT CGAAACTAAA GTCCAGTATT TTTTCGACCA GGGGGCTAAC
GTAAACCACT CTGGGTATTT CGAAAACGAC CGAACCCGGA ATGCGTTGTT GCTGGCTTTA
CGGAGCACCG GCGATGCCCC CATACCCGGT TTTTCTAAAC TGGATAGCCG TACGTTCAGC
CAGGAGGAGA TTCGGAATAT AAGCTCAATA ATGCCGGGAG GCAAAGTAGC GCCCACGCCG
GTATCGGGCA CGAAACCAAT TGTGGTCTTG CTGCCGGGTA TTATGGGCAG TACCCTGACC
GTTAACGGTA AATCGGTATG GATCAATTAT TTGAGCTTTC TCGGCGGTGG CCTTACCTCG
TTACTGCATA ATAATGACAA CAACAGGTAT GTAAAAGCAG ACGGGCTCGT GGGTAGTGCG
TACAAAAAAC TGGCCGATGC GTTGTCGCGG GATTACGATG TGGTTGTTTT TCCGTTCGAC
TGGCGCATCG ACATGGCCAC CAATGCTGCA GCACTGGATC GAAAGCTGAT GGACTTGAAG
CAAGTGGGGC AGCCGGTTAA ACTCATCGCC CATTCTATGG GGGGCGTGCT GGTGCGGGAC
TATATTATCC GATATGCCGA CAACTGGAAG TTGTTGCAGG GCATTCAAGG GTTCCGGCTC
CTGTTGCTGG GAGCGCCCCT GGGCGGTTCG TTCCGGATTC CCTACGTATT GTTTGGGCTG
GATTCCCTGA TTCATACGCT GGATTTTATC GACGTAACCC ACTCCAAAAA GGAGCTGCTG
GCAGTGTTTT CCCAGTTTCC GGGTATTCTT AGTCTGTTAC CGCTAACTAC CGACAAGGAA
AATGATTTTG CCAGCCGCGA AACCTGGGAG CGCATGCGGG CGGCCTTTGG CGATACTAAC
TGGCCCATTC CCGGCGATAC TTTATTAGAT GATTTCAAGA ACTATCGGGA GGATATTCTT
AAAAAAGCAG CGACCATCGA TCTGTCGCAG GCCGTTTACA TCGCCGGTCA GAGTCGGATG
AATCAGCAAA CCATCAGCGG GTTCACAACG GACAATAACC GGCTGACGTT CCTGGCAACG
AAAGAGGGCG ACGAGAGCGT AACCTGGGCG AGCGGTATCC CCCAGCAGCT CGTCGAGCGT
AACGCCGTGT ACTACTCCGA CGTAGCGCAT GGTGAACTGG CGAATGAGCC CCGGTTGTTT
GGCGCCATCC GTGAACTGCT GGATACGGGC ATAACCTCGC AGCTGAAACG GGTTCGGCCG
GTAGTGCGTA GTCTTGAGCG GGAGTTTAAA GCGAAGACTA TCGTTAATTT TGACCTCTCA
TCTACCGGCG TTGAGAAGGT GCTGATGGGC CTGAGTACCA ACGACCAGTT TGCAACCAGC
GACGTTCCCA TAACGGTTTC GGTCAGTAAT GGCGATTTGA AATACGCTAT GCACCCGCTG
ATGATCGGCC ACTTTGAGGG TGATGGTATC ATTTCTGCTG AGAAAGCGGT TAACTGGCAT
TTAGGTGGCG AGTTAAGCCG CAGGCACCGG CTAGGTCTGT ACCCGGGACC TATTGGCACC
AGTGAACGGG TAGCTTCAGG CAGCACCAGA GGATTTAGAG GGGCAATAAT TGTAGGGCTG
GGCAAACAGG GTCTTCTGAC AGAATACCTG CTGACCAGCA CGGTGGAGCA GGGTACATCC
AAGTATCTGG TAAACATAAA CAGTAAACCC GATAACCTAA CTGGCAGGGA GGCTATCCCC
GAACGGGTTG GTATTTCAAT GCTGATTATT GGCTCGGGCT ACGGTGGACT GCGTATAGAG
AACTCCGTGA GGGCCATTAT ACAGGGTGTG CAGAATGCAA ACACAAAGGT GCGGCAGATT
TATGACTCCC CTAAGCTCAT CGACGAAATT GAATTTGTTG AACTTTATAA AGACAAAGCC
CTAACCTGTA TAAAGGCCAT CAGTGCGATT GAAAAGGACG AAAGCCGATC GCTCAACATA
TTCAGGAATA GTAATAAGAT AAAAGAGCTA ACCGGTTTGC GGGAGCGGTT GCCCATTGAT
GACATGACAG AATGGTGGAC CCGCATCAAC GTAAGTTGTG AAAAGGATGA GTTTGGCCTG
ATTGATTTGC AACGTAATCT GCAATTCGAA ATTTCGACCG ATGCTGCCCG GGTTGAAAGC
CAACCACTAT CAACCATGAA TAATACACTT GCCAGTATGC TGGAGGATTT GTCCCGAAAG
GATGAATGGT CGGCAGACCT GGCCAAAGCT GTTTTCGAGT TGATGATTCC CAATAGTTTT
AAAGAACAAG TTAAGCGGCA AAATAATATT AACTGGATAC TGGACAGCTA TACGGCGGCT
TTCCCCTGGG AGCTTTTGCA GGATAGTGGC GGTAACGCCA GGCCGCTAAG TGTCAATGCC
GGCATGGTCC GGCAACTGTC AACCGGTAAC ACCCGCGCTA ACATTACGCC CGTTCTTGAA
CCTACCGCCA TTGTCATTGG CGATCCTGAT CTGGGCAATC CCGCTATTCA ACTGAAGGCA
GCGCTTGAAG AGGGAAAAAA AGTCGCCGAC TTGCTGAAAA CGCAGGGCTT TGAGGTAAAC
TCCCTGCTTA ATAAATCAGC GTCAACGATT TTGCTGGAGC TGTTCAGTCG AAATTACCGA
ATCATACACC TGGCAGGGCA TGGCGTATTT AACCCTGACC CGAAAGCGCC AACCGGTATG
CTTATTGGCA AAGATGCCTA CTTAACCCCG GCCTACATTA AGCAGATGAG CAATGTGCCC
GAGTTGGTTT TTGTGAACTG TTGCTTTTTG GGCCAGTTTG ATGGGGCGGC AGAATTAGCC
AACAACAACC GATTAAAGCT GGCGGCCAAC ATTGGCACGC AGTTGATCGA AATTGGGGTC
AAAGCCGTTG TGGTGGCAGG CTGGGCAGTA AACGATACAG CGGCCCTCGA CTTCGCCGAG
GTATTTTATC AGTCGATGTT CGAAGGGTAC AGCTTTGGAG AAGCTATAAA AAAGGCGCGG
AAGCTGGTGT TCGAAAAGCA TGGAGCGCGC AATAACACCT GGGGCGCTTA TCAGGCTTAC
GGTGATCCGT TTTATCGGCT CTTGACAAAA ATGAGGCTAA CAAAACCGAA CTATAATTTT
GTCATTCCTC AGGAAGCTGA AATAGAACTG AGCAATTTAC TCAACCGGGT CGAAAGCGGG
GGGTATGATC TTGAGGAGGT TATGCAGACG ATGGACGCCA TCGATAAAGC CCTCATTCGG
GAGAGCCTGA GCAGCGGCCG AATCATTGAA CTACAGGCAC TCCTTTTCAG CGGGTTGAAT
ATGTACGACC AGGCTGTAAC CCTGTTTGAA AAATTATGGA AAGAAGAAAA GGCATCCTTC
TCCTTTTCGG CCACGGAGAA ATTCTGCAAC ACCAAAGCCA AGTATCATGT GCGGGCTATA
AAAAATATAA AGAAGGAGAG TGTTGCAGTT AAGCCCGAAG TGCAAAAACA AGCTGAAGAC
GCGATCCACG AAGTTATTTT GAAGATGAAG GGTATACTTT GTTTCGGAGA AACGGCAGAA
CGGATAAATA TCCTCGCCGG TACCTACAAG CGGCTGGCTC AAATTAGCAA TGGACAGGAT
AAACTGGATG CGTACGTCTG CTCGGCCAAT ACATACAAAA GGTCGTATTA TATGCAGGGT
AATAAAACAA AGTTCTACCC GCTTATTAAC TGGCTATCCA TCGAAAATGC GTTGGTTCTT
GCCAATGCCA GGAAATGGGA GGAGGATGGC CTTGCTAAGA AAGAGGATTT ACAGGGACTT
CTGAAGACAG AATTAGACGC AATCGGAACA AAAGACAAGG AAGAAAAAGA TTTCTGGGAC
TGGATCTCCG AAGCAACCAT CCTACTATGC CAACGGTTGC TTGGCGATAA GACTATAAGC
GAAGAGGCTT TACTGGCTAG TTACACGACT GGTTGGGGTT ATATGGGTAG TCAGGGCCAG
CATCAGGCAG AAATCGAGCA CCTCGACTTT CTGGAGGATG CCCTGAGCAT AACCGATTCC
GAAAAAACAA AAGATAGTCT GGCCGTGGTC AGACGGATAA AAATGACGCT GGAAGGGATG
ATGTGA
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| Protein sequence | MATSIYKLQR ETKRTADDSW EWSICVEAGK AALNKIDSVV YEIPFPENPV REVYDSESRF
RLSDVYTAAF TANVEIRLKD GTTENTKINI DVNEAPLTVN APRKQTESEA VKPTSGFSIQ
SIVLQGDLDE SFDSEESETL TLDAVYTVRP ATRAGNTPRH VVPVVDEAGH PKVIEFTFRK
VSGSEADAEI DTDTVWIGDL TTIDDIFPGT STQVRGIENG QGRTVVIPAE LSVGESNRSG
MLPRIALKLV RIFTRREKVE DSRPQIEKAV RDLAIRLEDQ QLDNRTGLFR LTEQFELEDI
KLQNGGNYLL FIHGTMSSAK GAFDKLKDTP VWTFINQTYE NRVLAFQHKT LTQSPLENVL
ELVKELPKTA TLTLISHSRG GLVGDILNRF CLSDTSKRGF SLNEKNYLRR QNRDNDLRLI
EEIDAAISNK NITIAKFIRV ASTASGTTLL SHRLDTFFNV IANVIGLAIL PAFGLVRDLI
ATVLESRQDV SILPGLEVQS PGSPFNQMLN NANPDVLIDT PLFIISGDAK LSLRWQAIKV
ALTNLFFLGD NDFVVDTRSM YNGIRRVETK VQYFFDQGAN VNHSGYFEND RTRNALLLAL
RSTGDAPIPG FSKLDSRTFS QEEIRNISSI MPGGKVAPTP VSGTKPIVVL LPGIMGSTLT
VNGKSVWINY LSFLGGGLTS LLHNNDNNRY VKADGLVGSA YKKLADALSR DYDVVVFPFD
WRIDMATNAA ALDRKLMDLK QVGQPVKLIA HSMGGVLVRD YIIRYADNWK LLQGIQGFRL
LLLGAPLGGS FRIPYVLFGL DSLIHTLDFI DVTHSKKELL AVFSQFPGIL SLLPLTTDKE
NDFASRETWE RMRAAFGDTN WPIPGDTLLD DFKNYREDIL KKAATIDLSQ AVYIAGQSRM
NQQTISGFTT DNNRLTFLAT KEGDESVTWA SGIPQQLVER NAVYYSDVAH GELANEPRLF
GAIRELLDTG ITSQLKRVRP VVRSLEREFK AKTIVNFDLS STGVEKVLMG LSTNDQFATS
DVPITVSVSN GDLKYAMHPL MIGHFEGDGI ISAEKAVNWH LGGELSRRHR LGLYPGPIGT
SERVASGSTR GFRGAIIVGL GKQGLLTEYL LTSTVEQGTS KYLVNINSKP DNLTGREAIP
ERVGISMLII GSGYGGLRIE NSVRAIIQGV QNANTKVRQI YDSPKLIDEI EFVELYKDKA
LTCIKAISAI EKDESRSLNI FRNSNKIKEL TGLRERLPID DMTEWWTRIN VSCEKDEFGL
IDLQRNLQFE ISTDAARVES QPLSTMNNTL ASMLEDLSRK DEWSADLAKA VFELMIPNSF
KEQVKRQNNI NWILDSYTAA FPWELLQDSG GNARPLSVNA GMVRQLSTGN TRANITPVLE
PTAIVIGDPD LGNPAIQLKA ALEEGKKVAD LLKTQGFEVN SLLNKSASTI LLELFSRNYR
IIHLAGHGVF NPDPKAPTGM LIGKDAYLTP AYIKQMSNVP ELVFVNCCFL GQFDGAAELA
NNNRLKLAAN IGTQLIEIGV KAVVVAGWAV NDTAALDFAE VFYQSMFEGY SFGEAIKKAR
KLVFEKHGAR NNTWGAYQAY GDPFYRLLTK MRLTKPNYNF VIPQEAEIEL SNLLNRVESG
GYDLEEVMQT MDAIDKALIR ESLSSGRIIE LQALLFSGLN MYDQAVTLFE KLWKEEKASF
SFSATEKFCN TKAKYHVRAI KNIKKESVAV KPEVQKQAED AIHEVILKMK GILCFGETAE
RINILAGTYK RLAQISNGQD KLDAYVCSAN TYKRSYYMQG NKTKFYPLIN WLSIENALVL
ANARKWEEDG LAKKEDLQGL LKTELDAIGT KDKEEKDFWD WISEATILLC QRLLGDKTIS
EEALLASYTT GWGYMGSQGQ HQAEIEHLDF LEDALSITDS EKTKDSLAVV RRIKMTLEGM
M
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