| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0587 |
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| Symbol | |
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| ID | 8724315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 718253 |
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| End bp | 722434 |
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| Gene Length | 4182 bp |
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| Protein Length | 1393 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003385450 |
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| Protein GI | 284035520 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.836601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACCCG CCCAATCGAA CCGGCCCACT ACCGTCTGGC CTCTGGCCGA CCTGTTCGAC
GCCCTGCAGC GGGGCGGGTT TCAGCTGCGC CCGAACGATT ATACGGACCT GATGCAGGTG
CTGGATGCCT TTCAGCCGCA ATCTTACGCC GATTTGCAGG CTCTAGTTGC CCCCTTGCTC
GTAACCAGCG AGGAAGAACA GGGAAAGTTC GACCGTATTT TCGAGAAGAT ACAGCAAAAA
GAAGGCATAA AAACACAGGG TGCTACCAAG AGAAATAGCC CCTGGAAGTG GCTGGTTGCC
GGTTTTTTAA TCCTGCTGGC GTTGGGCTAT GTGGCCTTTT TCTGGCCCGG CCCGGCTTTC
AGAACGGGTA TTCATCAGGT AAATCCGGTT GGGCCGGTCG AGGTAGGGGA TACGCTTGTC
TTTTCCGTCG ATTCATCCAT GCAGAAAGCC GCCGGACCTT TGGCGCGCTG GCAATGGGAA
ACACCCGACG GACGACCTTA TCCGAACGCC CAGGCGCCGA CGCTGCGGGT GCCTGCCTAC
CAGGTTGGAC CGCTAACGGT AAACCTGCGA AGTCAGCACG GTCGGGGGCT GTTACTTACT
ACCTGGACGG ATAGCCTGCA AGGTATTACT TACCCCATCT GCGATAAACT GCCGGTGGTT
AAACTCGATA GCTTCCGGCT ATCCGACGCT CCCCTGCGTT ATCGGTTCAG GGCACGTCTG
GTTGGAGAGG TAAAGACCGT TCAGCGCATG CAGTGGCAGC TCAACGGAGC CGTTGTCGCC
AGCAACCGCA CGGAGTGGGA GCACACCTTT CGGGCGGGAA GCGCACCGGG TTATCACGCC
GTTCGCGTTG AGGCCACAAC CGATTCCACC AGGCGGCTTT GTTTCGGTGA TGGCCAATTG
ACGGTGGGCG TTCCGGGCAG TAATGAGCCA CCTTTTACCC TCGATGTGCA GGCGGTCGGT
ACACCTGTTG TCCTTAAAAC AAGCCTGAAC CGCGGATTAC TCTGGGCCAG CTGGGTAGCA
GGCGGGTTGT TGCTACTGCT GGCAGTCGTT TACATATGGC TGATGAGACG TAAGCCGAAG
TCGACACCGC CCCTGCCGTC CGACACTAAC CCAATGGCCC GGTTCACCAG TGATACGCCC
CCACTGGAAA TACCGCTGGA AAACCGGGAG GCCGAGTTAA TAACCCTGGA TCAATCGTTT
TACCGACTGG TGCGAACTCT TCGGCAACCC GTGGAAGGCG AAGTCAAGCG GCTGCATATT
GGCCAAACCA TGCAGGCAAC CATGCTGGAG GGGGGATTCC CGACCTTAAT TTTTCAGCCT
CATCTGGCCG AGAGAAACTA CATCTTCCTG ATCGATCGCA GCCAGGTTCG CAGCCAGCAA
GTGGCCCTTT TTGAGTACCT GTTCCGGGTG TTCACGCAGG AGAACGTTTG TGTCGAACGC
TTCTTTTTTC ATAAAACCTT CGCCCTGTTT ACCAACGAAA CGCATAAGAA GGGCCTGACG
CTCCAGCAAC TTGCCGACCT TTATCGGAGT CATACGCTGG TAATCTGGAG TACGGGTTAC
CCACTACTTT ACCCGCCTTA CCCCGTTGTG GAACCCGCCA TCCGCGACGC GCTGGCTGAT
TGGGAGTCGA GGGCCATTCT GACACCCGTA CCTTTTGCCG ACTGGAGTAG CAAAGAGCGG
GCGCTACAGA CCGATTTTCT ATTACTTCCG GCCGACATGC CCGGTCAGCT GCGGTTGATG
CAGGCCCTTG CTGAAAAACA AATGCAGCAG GATGCCTATC TACAACAGCA GGCCGACCTG
TATTCATTAG CGGACCTCGA TGCCGAAGAT ACCGACGAAC TGGAGGACTA CCTGGGCGAA
GACCTGTTTC AATGGCTGGC AGCACTCGCT ATTTATCCAC GTATTCGCTG GGAGTTCGTT
CTTGAGATAG GATGGGTGCT GATGCCACCC GAAACGGTCA ATTTCACCAA TCTGCTCAGG
CTGGCACGCA TTGGCTGGAT GAACGAAGGC CATTTTCCGG ACTATATCCG CCTGGAGCTT
CTTAAAAAAC TGTACCCTGA AAATGAAGCA AAAGCCCGGC AACGCCTTTT GCAGATGCTT
GCCTATGCCG AACAGTACTT TCCGGGTGAG CATTTTTATG ACGGAGAGAA ACACCTGCTG
GAAACTGCTA ACCAGTTTGC CCTCTATGCC TACGACGCCG ATACTTTCGC CGACTATCGA
CCCGCGCAAA AAGCATTTAA AGAGCTCTAC GAGCAACGAC TTTACCCGGA TGGAGCCATG
CTCCGTTACC TGGAAAATCC TAATGGGAGC TGGACAACCC TGCTGCCTGC CACCCAGGTA
CCGGTTCCCG GCAAAGCGAT TAAATCAGCG GTTGTTCAGC TGCGGACTAT GGGTTTGCAG
GCGTACCTCA CTACACTGAA CGAGCCGATT GTCAATGACC TTCCTGAACG TACGGCAGAC
AAACGGGAGT GGTATCTGCT GGCTGGCATT GTCGTTGTCT TCCTGAGTCT TATTGGGCTG
ATTTACAGAA TTACCAGACC GCAGAGCCGG GAAATTGACT GGAACCAGTT AGTCCCGGTT
ACCATTGTTC TGGACACAAC TGCCTGTGCA CCGCCAGAAA GCAACCGCGA TCTGGCTGAG
TCTGGTGCCG TGCAGGGTCG CTGGAACGTT TATCTGAATA ATTCACGCTA TGGCTTACGG
AACCTACAGG CTACCCGGTC GTTCCTGCTC CGGGATCTGG TAGCCAGCAC AGTGGGCGCA
CCAACCGACT CAATACCCCT GCTGGCGACG CTCTCCGTAA GCGATACAAC CACCGGTTTC
AGTCGGCAGT ACAGTAACGT GTCGATCAGC GGAGATACGC TGCGGGTCCG AATCAACTGC
CCTAAGCCGA AGGTGGGGCT TTCCGGCAAG CTTCGTGTTT CGGTTGAGTA TACCAACCCC
AATGCGCCGA ACTATGCCAA AATCAGAGCC TATATGAACG CACTGGAAGC GGATACAACG
TTCGAGTTTG TCCGGCCACT GAAACCCGCC ATTTTCACCG GTCGGTCGCA GGTGCGCTAC
TTCCGGACAG CCGACAAAGC TGCGGCAGAG ACTCTGGCTG TGCAGGCGGG TAAAGCCCTG
GGGATACCCA TTGGTATTCA GTTAATCAAA GACAGTCGTA CATTCCTCAC GCATCTGGAA
GTGTGGATTA ACAATGGCGT ATCGACCACC AAATTTACCT GTCAGCCGGT GGCCGGAAGC
TGGTTCAGGC AGTTTAATGG CTGGCAGGCA AAGGTCGGTG ATGGATCTAC CTCTAAAATC
AACACAGATG GAAAAAGCAT TGGACTCGAA CAGGAATCGG TGCCTGCCAA AAATGTAGGT
GCAGCGTTAT CCGTTCAGTC TATTGGCGTT ATCGAAAGCA TCTGTCAGCA GAATGGGGTT
TATCTGGTGA GTGTTTACAG TCGGGGTGGC CGAACAGTGC TGGTCAAAAA TGTGACCCGT
ACCGCCTGTT ATCTGGCCGT CGTTAATCTC GGTACGATCT CGGTTTCTAC TATACAGGAG
CAAGCGTATA TCGATAACCT GTTGAAGCGT ACTGCATTCC TGCGGTATTC AGCTCCGGCT
ACAGTTACCG GAAAGGCAGG TCGCAGCGTG ATTAGTCCAA CGCCGGGAAG TAGGGATACG
CTTCCCGGCC AGCCGCAAAG CCAGTCAGAA ATTAATCCGG CGGTTCAGCA GATAGTTAAG
CCCGCTAATG ACTATAACAC GAAGAGTAAT CAGGCGAAAA CGCCGACTCA AACTAGTACG
GAGAACTTGC GGGTAGTGTC CCGAAAGGAA ACCAATGCCA CCTTACAGGC AGGCATTAAC
GCATACCAGC GTGGTCAGTA CACCGAGGCT ATTGTTATTT ATGACAGGTT TCTGGCCGGG
GAGCCTGCCA ACGCCTATGC GCTGAATCTC AAAGGGTACT CTCTGTTCAA ACTGAAACGG
TACGAAGAGG CTGTAACCGC TCTGCTTACG GCTACAAAAG CCGATCCGGG CTATGCCTGG
GCCTATTTTG ACCTGGCTCG TGTCTACTGC GCCCTGGGGC AGTCGGCAGC CGCTGATGAA
GCCAGACTGG AGGCCATTCG GATTCAGCCG ACGATGCGGT CGATCATGCA GAAAGATAGC
GAGTTTATGC GTCTGTGCGG ACCCGAACCC AGTGCTAAAT GA
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| Protein sequence | MTPAQSNRPT TVWPLADLFD ALQRGGFQLR PNDYTDLMQV LDAFQPQSYA DLQALVAPLL
VTSEEEQGKF DRIFEKIQQK EGIKTQGATK RNSPWKWLVA GFLILLALGY VAFFWPGPAF
RTGIHQVNPV GPVEVGDTLV FSVDSSMQKA AGPLARWQWE TPDGRPYPNA QAPTLRVPAY
QVGPLTVNLR SQHGRGLLLT TWTDSLQGIT YPICDKLPVV KLDSFRLSDA PLRYRFRARL
VGEVKTVQRM QWQLNGAVVA SNRTEWEHTF RAGSAPGYHA VRVEATTDST RRLCFGDGQL
TVGVPGSNEP PFTLDVQAVG TPVVLKTSLN RGLLWASWVA GGLLLLLAVV YIWLMRRKPK
STPPLPSDTN PMARFTSDTP PLEIPLENRE AELITLDQSF YRLVRTLRQP VEGEVKRLHI
GQTMQATMLE GGFPTLIFQP HLAERNYIFL IDRSQVRSQQ VALFEYLFRV FTQENVCVER
FFFHKTFALF TNETHKKGLT LQQLADLYRS HTLVIWSTGY PLLYPPYPVV EPAIRDALAD
WESRAILTPV PFADWSSKER ALQTDFLLLP ADMPGQLRLM QALAEKQMQQ DAYLQQQADL
YSLADLDAED TDELEDYLGE DLFQWLAALA IYPRIRWEFV LEIGWVLMPP ETVNFTNLLR
LARIGWMNEG HFPDYIRLEL LKKLYPENEA KARQRLLQML AYAEQYFPGE HFYDGEKHLL
ETANQFALYA YDADTFADYR PAQKAFKELY EQRLYPDGAM LRYLENPNGS WTTLLPATQV
PVPGKAIKSA VVQLRTMGLQ AYLTTLNEPI VNDLPERTAD KREWYLLAGI VVVFLSLIGL
IYRITRPQSR EIDWNQLVPV TIVLDTTACA PPESNRDLAE SGAVQGRWNV YLNNSRYGLR
NLQATRSFLL RDLVASTVGA PTDSIPLLAT LSVSDTTTGF SRQYSNVSIS GDTLRVRINC
PKPKVGLSGK LRVSVEYTNP NAPNYAKIRA YMNALEADTT FEFVRPLKPA IFTGRSQVRY
FRTADKAAAE TLAVQAGKAL GIPIGIQLIK DSRTFLTHLE VWINNGVSTT KFTCQPVAGS
WFRQFNGWQA KVGDGSTSKI NTDGKSIGLE QESVPAKNVG AALSVQSIGV IESICQQNGV
YLVSVYSRGG RTVLVKNVTR TACYLAVVNL GTISVSTIQE QAYIDNLLKR TAFLRYSAPA
TVTGKAGRSV ISPTPGSRDT LPGQPQSQSE INPAVQQIVK PANDYNTKSN QAKTPTQTST
ENLRVVSRKE TNATLQAGIN AYQRGQYTEA IVIYDRFLAG EPANAYALNL KGYSLFKLKR
YEEAVTALLT ATKADPGYAW AYFDLARVYC ALGQSAAADE ARLEAIRIQP TMRSIMQKDS
EFMRLCGPEP SAK
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