Gene Slin_0585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0585 
Symbol 
ID8724313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp715976 
End bp717235 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385448 
Protein GI284035518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.559552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTCT ACAACGTATA CATATCATCT ACCTACCGTG ACCTGGGGCT GTACCGAAAA 
ACGGTCATGG AATCCTTGCA TAAGGTGCCC AACTTTAAGG TAGTGGGTAT GGAATATTAC
ACAGCAGAGG ATGCGCAACC GCTCGACCGC TGCCTGCGTG ATGTAGAAGC CTGCGACATC
TACCTGCTCA TTCTGGCTAA CCGCTACGGC TATGTAATAG ACGGGCAGGA GTTGTCCATT
ACCCATCAGG AATACAACAG GGCAAAGGCG CTGAACAAAG TCATCCTCGT TTTCAAAGCC
GAAAACCGCG ACGGTCGCTT TTTGCCCGAT GCTGACGAAG CAGGACAACC GTCATCGGTT
GAGAAGCAGA AAAAACTCAA TGCGCTGAAA GCCGAGGTGG GGAGCCGGTC ACTGTCGCAC
CCAGAGGGCT TCACGTCAGA GTATCACCTG GCCCTGCAGG TGATGGAGTC TTTGGTACGC
AATCCAAGGG TCGATTTTGA CGGTGAATTA CCCGAAGATC GCAAAATATT CTGCAACCGG
GCCAATCAGG TGTTTGACTT TTATGACCTC GTTCGCCGGA AAAAACCGTT CAACGTTTTT
CTGATTCAGG GGCATCGGAT GAGTCTGGGC CGCAGCCTTG TCGAACGACT GAGCAAGTAC
TATTTAGGGG TTCAGGAACC TGCAATGGTA AGTTATCATG CCCTCATTGC AGACCCTTCA
TACCCAAATT TCCGTCGGCG GCTGGTGAGC GAACTCTGCG ACCAACTGCT GCCCAACGAT
CCGGACCCGC CCGTCGACCC GGCGGGTTTA CTGGCAGTGC TGCACCGGAA CGGCGTCGGG
TCTCTGTCGT TGTTATGCCC GATTAGTAAT GAGGTTCAAT GGCAGGACGG CTATCCGTTG
CTGGCGGCTA TCTTCGACGA GTTTGAACAG GCCAGCCTGA CGGTGGCGGG TATTCGGGTG
TTCTGGTTCA TTGTCATTGA TGTACCGGAC GGGCTGCAGC AGCAGGTTCA ATCGCCGTAC
GTAATGGCTG CCCCTCCGCT GAAAATGCTT GCCGGAACGG ACATCGAAAA CTGGCTTCGT
ACCTACATCG ACAGCGATGA TGAGATTGTG TATCTGCTTC AGGACCTCTG CTTTCCAGAC
ACCTTGACTC CGGGCGAGCT GACCATGCAG GAGGCTCAGA AGCAGATCCG AAAATTCATT
AACCGATTTA ACCTTCGCCG GAAAACGAAC GACCAGCCTT TGCTGGATAT ACTGCCTTAG
 
Protein sequence
MSFYNVYISS TYRDLGLYRK TVMESLHKVP NFKVVGMEYY TAEDAQPLDR CLRDVEACDI 
YLLILANRYG YVIDGQELSI THQEYNRAKA LNKVILVFKA ENRDGRFLPD ADEAGQPSSV
EKQKKLNALK AEVGSRSLSH PEGFTSEYHL ALQVMESLVR NPRVDFDGEL PEDRKIFCNR
ANQVFDFYDL VRRKKPFNVF LIQGHRMSLG RSLVERLSKY YLGVQEPAMV SYHALIADPS
YPNFRRRLVS ELCDQLLPND PDPPVDPAGL LAVLHRNGVG SLSLLCPISN EVQWQDGYPL
LAAIFDEFEQ ASLTVAGIRV FWFIVIDVPD GLQQQVQSPY VMAAPPLKML AGTDIENWLR
TYIDSDDEIV YLLQDLCFPD TLTPGELTMQ EAQKQIRKFI NRFNLRRKTN DQPLLDILP