| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0550 |
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| Symbol | |
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| ID | 8724278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 675396 |
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| End bp | 679562 |
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| Gene Length | 4167 bp |
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| Protein Length | 1388 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | histidine kinase |
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| Protein accession | YP_003385413 |
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| Protein GI | 284035483 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.23656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.89256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGCA CTAAATTTTA CGCTCTATTG TCGCTGGCGA TATTATATGT TAGCCTGTCT
ACAAAAACGT TTTCTCAGTC TGACGCACAG CATTTTAGTC ACCTCAGCGT CGACGAGGGA
TTGTCCCAAA GTAGTGTATA CGCCATTACG CAGGATGCCA AAGGGTTTAT GTGGTTTGGT
ACCCGCAATG GACTGAACCG CTACGATTCC CACCAGGTCG TTGTGTACGA ACACAAATCC
GGTGATGCCA ACAGCCTGGC CGCAAATACG ATAAACAGCT TGTTGCACGA CCGGAAAGGC
CAGCTTTGGG TGGGAACTAC CAAAGGTATA GCCGTCTATC GACCTAAAGA GAACAATTTT
TTGCGGTTGT CGCCGGTCAT AACCAAAACG GGTAAACCCG CCGACTCCTC CATCAACGTA
CTGGCCGAAG ACCACCAGAA GCGCATCTGG GTAGGTACGC CCCGTGGACT TTTCCGGCTT
CACGCTACCA ACCTGCGTCG TGCTGACCGG CTAGTCGATC TGACTTACCA GCAGCAGGAC
CTCAGCCACC AAACCATCAG AACCTTATAC GAAGCCCGCG ATCACACAAT GTGGGTGGGT
ACATCGGCCG GACTCGCCCG CTTGCAGCGA ACCCCGGCGG GGCGTTTCAA ACTAACCAAT
TTTTACCTGA ATCCGGCCGA TTCCATTTTT CACAATACAT CGAATGGCAT CAACGCCATC
GTTGAAGATA AACGGGGTAG GTTGTGGTTG GGTACCGAGC GTAATGGCAT TGCCCTGTTC
GACCCGCAGC AGGGGCGGGT CATAACCTGG CATCCCGCTC CCGGTCTCGA TTTAAGTACG
CAGACGATCC GCACCATTCT ACCCGACGGC AAGGGGAACT ACTGGGTAGG CACCATGACG
GGGCTGCACA TTATCGCCCA GGATGGCAGC CGGTTTAGTA CCCTGATCAA TCACCCTAAC
GACGTCACGT CGCTGAGCGA TAATTCCGTA CGTTCGCTGT TTCGGGACCG TGACGGATCG
GTTTGGGTGG GCACTTACTA TGGTGGCGTT GGCATGTACA GCCCACTTGC CCGACAATTC
AGCGCCTATC GGCCACTGGA TCGGCAGGGT GGGTTACCCT TTAAAATTGC CGGGCCAATG
CTTCCAGCCA ACAGCCCCGC CCAGCGGTGG ATTGGTACGG AAGATAAAGG GTTGTTTCTG
ATCAACGCCG ATAAAAGTAT TGCCCGGCAT TATACCCACA ACCCGAAGCA GCATCAGTCG
CTTACCAATG ATAAGATAAA ATGCCTGCTG GCCGAGGGCA AGAGCGGGTT GTGGGTCGGA
ACTTTGAAAG GACTGAATTA CATTGACCTT CAGCAGAATA CCGTCACCCA GTATCTGCAC
GAACCCAACA ATCCGCATTC CTTGCCCGAC GATCACATTT ATGATGTGAA GCGGGATGCC
GAAGGAACGC TCTGGGTGGC AACCTATTTT GGCGGTCTGT GCCGGTTCGA TGAAAAGACG
AGATCGTTCA TCCCGCTGAC TCACCAGACA TCTCAGGCAT CCTCCCTAAG TTCCAGCAAT
ATCACCTGTC TTCTGCCTGA TAACAAACAG CAGCTATGGG TTGGGACACT GGGCGGGCTG
AATCGGAAAA TAACCGGTCG GGATGCGTTT GTGCGGTATA CACATCACCC CGGCAATAGC
CGATCCCTGA GCAATAACCA CATTATATGC CTGTTCGAAG ACCGAAAACA CCGGCTCTGG
ATCGGAACGC GCGACGGTGG ATTGAATCTG CTATTGCCCG ATCAACAGTC ATTCCGGCAT
TTTACAACCG CACAGGGCTT ACTCAGCAAT TCCATCTTCG GTATTCTCGA AGACAGCCGG
GGCATGCTCT GGCTCAGTAC CGATAAAGGC ATCGTTCAGT TCGACCCGGA GCGGTCGACG
TTTATTGCCT ACAATAAATA TGACGGCTTG ATCTGCAAAG AATTTACGCC GAATTCAACG
TTCCGGGATG CGCAGGGCTT GCTGTACTTC GGCGGTTACA ATGGTATTGT CGTCTTCAGC
CCGGAGCGTA TTCGGCGCAA CACGACACCC CCCAGGCTGG CGTTTACGGG GTTGCATTTA
TTTAATCAGC GGCAAACGAC ACCCTCGTCC GGAAACCGGG CCGATGCACC CGTGGATTTT
AGCCGCCCGC TGACCTTTAC GCACTGGCAG AATGTGTTTA CGCTGGACTT TGCCGCTTTC
AACTATATCA ATTCGCCTAA AAACCGCTAT GCCTATCAAC TGGTGGGCTT CGACAACGAC
TGGAACTACG TGAAAGACCC GCAGGCAACC TACATGAATC TGCCCGCAGG CGACTATGTG
CTGCGGGTAA AAGGGACGAA CAACGACGAT GTCTGGAATG CCAAACCGCT GGAACTGGCC
ATCACGGTCT TGCCGCCCTT CTGGAAAACT GCCTGGGCGT ATTGCCTGTA CATACTCGTC
TTTCTGGGGA TGCTGCGCTT ATGGTCGAGA TTTAACCGGA ACCGGCTGCA ACTGGCGCAC
GACCTGCAGG TGGAACACGA CGAGAAAACC CGCCAGCAGG CCCTTCACCA GACCAAGTTG
AATTTCTTTA CGGAAATAGC CCACGAAATC CGCACACCGT TGACCCTCGT GATGGCCCCC
ATCGAAGTGC TGGCCAACCA GTATACGGCC GATACATTGA TTCAGAAGCA GGTATCCATT
ATGCGGAACA GCACCGACCG ATTGCTTCGC TTGCTCAACC AGCTCCTCGA TTTCAGAAAG
CACGAAACCA GTCATGTGCA GCTACACCTG CAAACGGTTG ATCTGGTTGC TTTAATGCGA
ACCATTACCG ACTCGTTTCT GGAACACGCC CGGTCTCGCC GGATTACCCT GCGCAACGAA
TCGACCGTCG ATGTGCTGCC CGCCTGTGTT GACGTGGGCG AGGTTGAAAA GGTCATTTAT
AATCTGTTGC AGAACGCCCT GAAGTTCACC CCAACAGAAG GTACCGTATC GGTACGGCTG
CAACAGGATG TTCGTGGTTC CGGTCGGGCC GTTATTTTTA TCGAAGATAC GGGGCGTGGT
ATTCCGGCCG CTGATTTGGA GCATATCTTT GACCAGTTCT ATCAGGTTAA CCATCCGCAA
ACCCACGATA CCGGGTTTGG GCTGGGCCTG GCCCTCAGTA AGCACATCGT TGAACAGCAT
CAGGGACAGA TTAGCGTTGA GAGCAGCGAG GCAACCCCCC TGCAGCCTGG CTTTACGCGC
TTTACGATCA CCTTGCCCTT GTCGCTCCTG CCCCATAATG GAGCTGGAGA TTCCGTATCC
TATGCGCCAA TGGCCACCCC GCCCGTGACT CTATTTGCAC AGACGGAGCC CCTGCCGGTG
GTAGCTAAAC CAACTGACGG CAGCGAAAGG TCAATTGTTT TACTCGTTGA GGATCAGGAT
GATATACGAA CGTATTTGAA GGGCCTGTTT GTGGAGAAGT ACGACGTTAT GGAGGCCGCC
GACGGGGCGC AGGGCTGGGA CATTGCCACG CGAACCCTTC CTGATCTCAT CATTGCCGAT
GTAGCCATGC CCATAATGGA TGGTTTCGCC ATGACGCACC GGCTTAAGTC GGACCCGCGT
ACCAGCCATA TTCCGGTCAT TATGCTAACG GCCAAAGGAA CGGTCGATAG CCAGTTGACG
GGCCTGGAAA CCGGCGCCGA CGATTACGTG AGTAAACCGT TCCATCCGAT TCTGCTTCAG
GCGCGGGTGA GCAATCTGCT GGCTGTTCGG GAGCAGCTGA AGGCGAAATA TAATCGGCTC
GTGACCTTAC AACCGCAGGC CCAGACGCTG GACCATCCGG ACGAGAAATT CCTCAATCAG
CTCATGACCG TACTCGACCG CCAACTGAGC GAGCCCGACT TTAACGTAGC CAGTCTGGTT
ACTGAAATCG GCATGAGCCG ACCCGTTCTG TTTCGGAAGG TGAAAATGCT GACGGGCTTA
TCGGTCATTG ATCTGCTCCG GACAACACGA CTCAAGAAAG CCGAAATGTT GCTGAAGCAG
CGGAAAGTCA GCGTATCGGA AGTCGCCTTC GCCGTGGGAT TCAGCGATCC CAAATACTTC
AGTCGGGTGT TTCGCGCCCA TTTTGGCCAG ACGCCCTCCG AATGCAGCGC ACGGATGGAT
GTGTTGGTGG AGTCGTTAAA TGGTTAA
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| Protein sequence | MNGTKFYALL SLAILYVSLS TKTFSQSDAQ HFSHLSVDEG LSQSSVYAIT QDAKGFMWFG
TRNGLNRYDS HQVVVYEHKS GDANSLAANT INSLLHDRKG QLWVGTTKGI AVYRPKENNF
LRLSPVITKT GKPADSSINV LAEDHQKRIW VGTPRGLFRL HATNLRRADR LVDLTYQQQD
LSHQTIRTLY EARDHTMWVG TSAGLARLQR TPAGRFKLTN FYLNPADSIF HNTSNGINAI
VEDKRGRLWL GTERNGIALF DPQQGRVITW HPAPGLDLST QTIRTILPDG KGNYWVGTMT
GLHIIAQDGS RFSTLINHPN DVTSLSDNSV RSLFRDRDGS VWVGTYYGGV GMYSPLARQF
SAYRPLDRQG GLPFKIAGPM LPANSPAQRW IGTEDKGLFL INADKSIARH YTHNPKQHQS
LTNDKIKCLL AEGKSGLWVG TLKGLNYIDL QQNTVTQYLH EPNNPHSLPD DHIYDVKRDA
EGTLWVATYF GGLCRFDEKT RSFIPLTHQT SQASSLSSSN ITCLLPDNKQ QLWVGTLGGL
NRKITGRDAF VRYTHHPGNS RSLSNNHIIC LFEDRKHRLW IGTRDGGLNL LLPDQQSFRH
FTTAQGLLSN SIFGILEDSR GMLWLSTDKG IVQFDPERST FIAYNKYDGL ICKEFTPNST
FRDAQGLLYF GGYNGIVVFS PERIRRNTTP PRLAFTGLHL FNQRQTTPSS GNRADAPVDF
SRPLTFTHWQ NVFTLDFAAF NYINSPKNRY AYQLVGFDND WNYVKDPQAT YMNLPAGDYV
LRVKGTNNDD VWNAKPLELA ITVLPPFWKT AWAYCLYILV FLGMLRLWSR FNRNRLQLAH
DLQVEHDEKT RQQALHQTKL NFFTEIAHEI RTPLTLVMAP IEVLANQYTA DTLIQKQVSI
MRNSTDRLLR LLNQLLDFRK HETSHVQLHL QTVDLVALMR TITDSFLEHA RSRRITLRNE
STVDVLPACV DVGEVEKVIY NLLQNALKFT PTEGTVSVRL QQDVRGSGRA VIFIEDTGRG
IPAADLEHIF DQFYQVNHPQ THDTGFGLGL ALSKHIVEQH QGQISVESSE ATPLQPGFTR
FTITLPLSLL PHNGAGDSVS YAPMATPPVT LFAQTEPLPV VAKPTDGSER SIVLLVEDQD
DIRTYLKGLF VEKYDVMEAA DGAQGWDIAT RTLPDLIIAD VAMPIMDGFA MTHRLKSDPR
TSHIPVIMLT AKGTVDSQLT GLETGADDYV SKPFHPILLQ ARVSNLLAVR EQLKAKYNRL
VTLQPQAQTL DHPDEKFLNQ LMTVLDRQLS EPDFNVASLV TEIGMSRPVL FRKVKMLTGL
SVIDLLRTTR LKKAEMLLKQ RKVSVSEVAF AVGFSDPKYF SRVFRAHFGQ TPSECSARMD
VLVESLNG
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