Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0544 |
Symbol | |
ID | 8724272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 668116 |
End bp | 669852 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | beta-lactamase |
Protein accession | YP_003385407 |
Protein GI | 284035477 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.129057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA TACGCTACCA GATCGGCTTA TCGGCACTCG TTTTCCTGCT TGTTTCGATT GCGGGCTTTG CCCAGACAAA ATCCGCAAAA ATCGACGCGC TCGTTCAGCA ATATGTCGCC AACCGCCAGT TCAACGGCTC CGTGCTGGTG GCCGAAAAAG GGCAGGTGAT TTTTAAGAAA GGCTACGGTA TGGCCAATAT GGAGTGGAAT ATTCCCAACG CGCCGGATAC AAAATTCCGG CTGGGGTCCA TTACCAAGCA GTTTACGGCC ATGCTGATCA TGCAACTGGT CGAAAAAGGG AAGCTGAAGC TGACCGGGAA AATCACAGAT TATCTGCCCG ACTACCCGAA AGCTACCGGC GACAAAATCA CGATTCACCA CCTGCTCACG CATACATCCG GCATCCCGAA CTACACCAAC TTTCCCAAAT TCTTCGAAAC ACAAAGTCGG GAGCCAGTTA CGCCCGAATC GTTTATAAAG ACGTTCTCGA ACATGCCACT GGACTTTGAG CCGGGTACCA AATTTTCCTA CAGCAACTCG GGCTACTTCC TGCTGGGTAC TATCATCGAG AAAGTAACGG AAAAATCGTA TGCTGAGGTA TTGAACGAAA ACATCCTTAA ACCTGCGCAG ATGATCAATA CGGGCTACGA TCTGTTTGGC CCCATTATAC CCAAACGGGC AGCGGGTTAT GAAAAGAAAG GGAATGCTTA CGTAAATGCC CCTTATCTGG ATATGTCGAT TCCATATGCG GCTGGGTCGA TGTACTCGAC CGTCGAGGAT TTGTACCGCT GGGATCAGAT TTTGTATACC GACAAACTAC TGTCGGCCAG TGGAAAAGCG GCTATGTATA CTCCGTTCAT TGACGGCTAC GCGTACGGAT GGGGTGTTGG AAAAGCAAAG ATTGGCCAGC TAAAAGACAG TCTGTTAGTG ATTGAGCACT CGGGTGGTAT CAACGGTTTC AACACCATTA TTAGCCGCTT GCCCAAAGAC AAGCAACTGG TCGTTTTGCT GAATAATACG GGTGGGGCAC CGCTCGGCGA TATGCGCAAA AACATCATGC GCATCCTGTA CGATCAGTCG GTAGAAGCCC CTAAAAAGCC CATTGCCGAC CTGCTGCGCC AATCGGTGCT GAATGACCCT TTGGAAAAAA CGAAACAAAA GTTTAGTGCC TGGAAAGCCG ATAAAACCTA TGCGGTGGAC GAAAATGAGA TCAACGCCCT CGGGTATGAA CTCATGCGGG AAGATAAGGA CAAGGAAGCA CTGGTTGTCT TTAACCTCAA TGCCGATGCG TTTCCGGAAT CGTATAATGT CTATGACAGT CGGGGTGAAT TGTATAAAAA CATGGGTAAC AAAGTAGCTG CCATTCAGGA TTACAAAAAG TCGGTGGCAC TTAACCCGCG CAATACCAAT GGGTTTTTGA TGCTAAAAGA GTTGGGAGAG ACTGTTGAGG TGCCCAAACA GGAAGGCGTT GTCGTGGATA AAGCTACGCT GGAATCGTAT GTTGGCGAGT ATCAGTTAGC ACCAAGTTTC TCCATTGTCA TCACGCGTGA AGGCGACAAA CTATACGGGC AGGCTACCGG ACAAAGTCGC TTCGAACTCT TCCCCGAATC CAAAACCAAA TTTTATCTGA AAGTCGTTGA TGCCCAAGTA ACCTTCTCCA GCAATGACAA AGGCGAAGTA GAGCAACTTA CTCTGCACCA GAATGGGCAG AATATGCCGG GCAAACGGCT GCGCTAA
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Protein sequence | MKKIRYQIGL SALVFLLVSI AGFAQTKSAK IDALVQQYVA NRQFNGSVLV AEKGQVIFKK GYGMANMEWN IPNAPDTKFR LGSITKQFTA MLIMQLVEKG KLKLTGKITD YLPDYPKATG DKITIHHLLT HTSGIPNYTN FPKFFETQSR EPVTPESFIK TFSNMPLDFE PGTKFSYSNS GYFLLGTIIE KVTEKSYAEV LNENILKPAQ MINTGYDLFG PIIPKRAAGY EKKGNAYVNA PYLDMSIPYA AGSMYSTVED LYRWDQILYT DKLLSASGKA AMYTPFIDGY AYGWGVGKAK IGQLKDSLLV IEHSGGINGF NTIISRLPKD KQLVVLLNNT GGAPLGDMRK NIMRILYDQS VEAPKKPIAD LLRQSVLNDP LEKTKQKFSA WKADKTYAVD ENEINALGYE LMREDKDKEA LVVFNLNADA FPESYNVYDS RGELYKNMGN KVAAIQDYKK SVALNPRNTN GFLMLKELGE TVEVPKQEGV VVDKATLESY VGEYQLAPSF SIVITREGDK LYGQATGQSR FELFPESKTK FYLKVVDAQV TFSSNDKGEV EQLTLHQNGQ NMPGKRLR
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