| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0509 |
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| Symbol | |
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| ID | 8724237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 625609 |
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| End bp | 626478 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003385372 |
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| Protein GI | 284035442 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.440598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGT TAGGAATGAA TATGTTCGTC TGGACGATGT CTATGGACGA AGACCTATCC
GATACATTTA ATTTTCTGAA AGAGAACGGC TTCGACTTTG TTGAATTGCC GGTAAACGAT
GTCAGCCTTG ATAAATGGCA TCGCATTGGC CAGCAGCTGA GCGAGTTAGG CATAGGCGTA
CAAACGTGTA CCATATGCGG CCCCGAACAC AGTCTGATCA GTCCTGATGA GGCCGTGCGG
CAGGCAAGCG TTGCTTATCT GAAGCAAGTT GTCGACTGCT CGCGGGCCGC TGGTTCCTCT
ATTCTGATGG GACCCGTATA CGCAGGGTTC AAGGAGTTCA CCGGTAAGCC CGCCACAGCC
GAGGAGTGGA ACTGGTCGGT TACGGGGATG CGCGAGGTGG CCGAATATGC CCAAACCCAG
GGTGTTACGC TTGCCATCGA GTACCTGAAT CGGTTTGAAG TATACCTGCT CACCTGCGCC
GATGAGGTAA TTCGCTACGT CGAAGACGTC AATCATCCCA ATTGCCGGGT TGCCTTCGAC
ACCTTTCACG CAAACATGGA GGAGAAAAAC ATAGGGGCTG CCTTACGGAA GTGTGCCCCT
TATCTGGTTC ATGTGCAGAT TTCGGAGAAT GACCGTTCCA CACCGGGGCA GGGCCATATT
AACTTTGAGG AAGTCTTCGC CGTCTTGCAG GACGTTGGGT ATGAAGGCCC AATTGCCATT
GAAGCCTTTG GTCCAAACCC ACCCGAACTG GCCTCGGCAA CGCACATATT CCGGCCCATG
TTCGAGTCAC CCGAGCAGTT GGCGGTCGAC GGACTCGCTT TCATAAAAAG CAAGCTGGCA
CAGGCCGTTC CTGTCGGAAG TGACGAATAA
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| Protein sequence | MNKLGMNMFV WTMSMDEDLS DTFNFLKENG FDFVELPVND VSLDKWHRIG QQLSELGIGV
QTCTICGPEH SLISPDEAVR QASVAYLKQV VDCSRAAGSS ILMGPVYAGF KEFTGKPATA
EEWNWSVTGM REVAEYAQTQ GVTLAIEYLN RFEVYLLTCA DEVIRYVEDV NHPNCRVAFD
TFHANMEEKN IGAALRKCAP YLVHVQISEN DRSTPGQGHI NFEEVFAVLQ DVGYEGPIAI
EAFGPNPPEL ASATHIFRPM FESPEQLAVD GLAFIKSKLA QAVPVGSDE
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