Gene Slin_0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0499 
Symbol 
ID8724227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp615519 
End bp616856 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385362 
Protein GI284035432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAT TTGCTAATCT GACTAATGTT TTAAACTCGG AGGTTTTGTC TCGTATAGCT 
ACATATATCG ACGAACCTAT CGAGAAAACA AGCAAGGCCG TCGATGGCCT TGTGTATACA
ATTGTGGGGG GGTTAATGAA ACGCACAACC AGTGAAATTG GCGTCAATCA GCTATTTAAC
CATATTCAAA AAGGCCGTTA CGACGGCACC CCTCTGGATA ATCTGGCTAC TGTGCTTCGT
GACCCTGCTC ACACGAACAT GCTCATTACG CAGGGCAACG ATGTTATTAG CCACCTGCTG
CCGGCCATGA AGAGTTCGAT AGGCAGCATG ATCTCGGGCT ATGCCAACAT CCGAAACTCA
TCGGCCATTT CGCTGCTGGG CTTAACAACA ACCATTGTTC TTCAGGTACT TGGCAAACAG
GTAAAGGAGC AAAAGCTGGA CGCCGACGGC CTGGCAGCTA CCCTGTTTAC CGAACGAGAG
TCTTTTGTCA ATATCGTGCC CGAGTCCTTT ATGCCTCAAC TGGTGGACAA AGTGGGCCTT
CATCAAATTG TTGCCGGTGC AGCCGGACCT GCCCGGCGCA CACCGGCAGA TGCGCCCGGT
AAGCCCGTTG CAACGGCAGC GCCCGTGCGC CCAACGATAG CCTATGATGT CGCCGACGAT
TCGGATAGCG ACAACGGGGC GCTAACAAAG TGGGGAGTTG GTATACTGGT CGCACTGGCA
CTGGCTTTCG GTGGGTATTA CCTTTATCAG AACACCCAAA AGTATTCAGA TGGCCAGGAA
GAAACGGCTG ATCTTGCTAC CGTTACCAGC GACACGATTC AGGCAGATAC CGTAACACGG
TCGCTGGCCG TTCCTAAAGA GCAGCCAGCC GCAACGGCCC CTAAATCGGC AACAACGGCT
ATCGCAACAC CAGCAACGGC CACAGCGACG ACAGCAGTAG CCGGGAGCCT GACCCGTGAA
ATGACACCCT ATCTTACCAA TCCAACCTTA CCCAAGGGAC GTTTTTTTGC GCTACCCGGA
ATTGCCTTTC AGCCGGGTTC CTTGTCGATG ACGGCCACTT CGCAGGCGTC TATCAACGAG
TTATCGACTC TGTTAAAAAC GTATCCACAG TTACAGATTC AGTTGGTTGG TTATGCGAAT
GATGCACAGG TCGGAATAAC GAACAAAGGA CTGTCTTTTA AACGGGTCAA TTTAATCAAG
CAGCAACTAA TTACATCGGG CATCAATTTC CAGCGCGTCG ATGCTATTGG ACGGGGTACG
GGTGTCATGC GAAACGACAC ATCCAGAATT CAGAGGCCGT CCATGCGTAA AATCGTGATG
CGGGTTGTTG TTAAGTAA
 
Protein sequence
MNLFANLTNV LNSEVLSRIA TYIDEPIEKT SKAVDGLVYT IVGGLMKRTT SEIGVNQLFN 
HIQKGRYDGT PLDNLATVLR DPAHTNMLIT QGNDVISHLL PAMKSSIGSM ISGYANIRNS
SAISLLGLTT TIVLQVLGKQ VKEQKLDADG LAATLFTERE SFVNIVPESF MPQLVDKVGL
HQIVAGAAGP ARRTPADAPG KPVATAAPVR PTIAYDVADD SDSDNGALTK WGVGILVALA
LAFGGYYLYQ NTQKYSDGQE ETADLATVTS DTIQADTVTR SLAVPKEQPA ATAPKSATTA
IATPATATAT TAVAGSLTRE MTPYLTNPTL PKGRFFALPG IAFQPGSLSM TATSQASINE
LSTLLKTYPQ LQIQLVGYAN DAQVGITNKG LSFKRVNLIK QQLITSGINF QRVDAIGRGT
GVMRNDTSRI QRPSMRKIVM RVVVK