Gene Slin_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0498 
Symbol 
ID8724226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp614895 
End bp615458 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content53% 
IMG OID 
Productputative lipoprotein 
Protein accessionYP_003385361 
Protein GI284035431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA TACAAGGATT TATTATGCTG TTGCTGATGG GTGTAACCGC CTGTTCGCCA 
TACCGTATTG TGCGAAATGA ACGCGACAGT GCAGCCCCCT GGACTACCTA CCGAACGTTT
GCGTTTGTAG ATACCAGCCG GGTTGATCCC GCACCGGGAA CAATTGAGTT CCGCTCCACG
ATGGAGCAGG TTAAACGGGC CGTTGCAACT GAGTTGACAA AGCGGGGCTA TCGGCCAGTG
AGTGAGGAGC GGAGTACGGG GCAGCCCGAT TTACTGGTAA ATATTGGAGC GGTCGTGAAT
GAGAGAACAC AAACCCGGCC CACAACAATT TACGAAGCGC CCCGGTATAT CGGCCAGTAT
CGGTATCACT GGCAAAGTCA GGACGTGCCG GTGGGTACTT ATCGGGAAGG TACGCTTAGC
GTGCACATTG TTGACGCCCG GAAAGAAAAC CTTATCTGGG ATGCCGCCGT ATCGAGTGTG
CTGGGTAAAA AAGGCGTCAC GTCGGAACAG ATCAACGACG CTGTCAGCAA GGTGTTTACG
AAGTTTTCGG CGGGAAACGC TTAA
 
Protein sequence
MKTIQGFIML LLMGVTACSP YRIVRNERDS AAPWTTYRTF AFVDTSRVDP APGTIEFRST 
MEQVKRAVAT ELTKRGYRPV SEERSTGQPD LLVNIGAVVN ERTQTRPTTI YEAPRYIGQY
RYHWQSQDVP VGTYREGTLS VHIVDARKEN LIWDAAVSSV LGKKGVTSEQ INDAVSKVFT
KFSAGNA