| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0466 |
|---|
| Symbol | |
|---|
| ID | 8724194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 581870 |
|---|
| End bp | 583138 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003385329 |
|---|
| Protein GI | 284035399 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAACTTC TCACCAAAAC CAACCGAATC TATCTGGCAT TTTCGCTGGT CATCTATCTG
CTGACTGCCA TTACTTTTTA CCAGATTATC CGGCTGGTCA TCTACGATGA AGTCGAGAAT
CGGCTGCGCG TCGAACGGCG GGATTTTGAA GCGTACGTCC GGGCGCATAA TACCTGGTCG
AACATCCCGT ATTTCGTCGA AAACAAAATC AATGTTACGC CTGTGCCGGG CAAGGTGGCT
CCGGTCCCAC CGGAGATTTT TACCGATACG CTTATCCTGA ATCGGTATGA CGATGAGCTG
ATTCCATTTC GGCAACTAAC GTTCTACCAG CCTATTCAGG GTGTATTGCA TCAGGTTGAG
ATTCGCAAAT CCCTCATTCA GACCTATCGG CTTATCGAGG TAATTACAGT GACGATGCTT
CTCTTTCTGG GGTTGTTGCT GGTAGGAACC TTCTGGTTCC AGAATAAGCT TTCCGGGCGG
CTTTGGCATC CATTTTATGA TACCTTATCA CGCATCAAAG GCTTTGATTT GGGCAGCGGG
GCACCCCTGG TACTGAACAA GCCCGAGATA ACCGAGTTTC GGGAACTGAA TGATGTCCTG
CAGAAGATGG CCGATAAGAT GCAGCAGGAT TACCGGAGCC TTAAAGAGTT TACCGAGAAT
GCCTCCCACG AAATGCAAAC GCCCCTGGCG CTCATCAATG CCAAGGTGGA ACAACTCATT
CAGAGTGAGC AACTAACCGA AACGCAAACC CACTGGATTG AGCGGATCTA CCAGGCATCC
CGCCGAATAT CGCGCTTGAA TCAGGGATTG CTGTTACTGG CTAAAATTGA AAATCGGCAA
TTCAACGAGA GCCTCCCAAT CGACTTATCG GCTTTGTTAA CCGAAAAGCT GACCGATATG
GAGGAAGTAC TGTCGTTCAA ACAACTGGCT GTCGATGTGC AGGTGCAAGA GCCTTTTGCT
GTACTTCTGC CTGCTTCATT AGCGGATAGT CTGGTAACAA ACCTGGTTAA CAATGCCATC
AGGCACAACC AGACAAATGG ACGTATTGAG TTGGTTTCGA CCGCCGGAGA ACTTCGCTTA
AGCAACACGG GTGCACCGTT GACAACCTCA CCCGAACGTC TGTTTGAGCG ATTTAAGAAA
GAAAGTCCCG GCCCGGATTC CGTAGGACTG GGCCTTTCCA TAATCCGTCA AATTGGCGAT
AGCTATGGCC TGAGCATTTC GTATCAGGAA ACGGCAGGTA TTCACTGCTT TCGCATCACG
AACCATTAA
|
|---|
| Protein sequence | MKLLTKTNRI YLAFSLVIYL LTAITFYQII RLVIYDEVEN RLRVERRDFE AYVRAHNTWS
NIPYFVENKI NVTPVPGKVA PVPPEIFTDT LILNRYDDEL IPFRQLTFYQ PIQGVLHQVE
IRKSLIQTYR LIEVITVTML LFLGLLLVGT FWFQNKLSGR LWHPFYDTLS RIKGFDLGSG
APLVLNKPEI TEFRELNDVL QKMADKMQQD YRSLKEFTEN ASHEMQTPLA LINAKVEQLI
QSEQLTETQT HWIERIYQAS RRISRLNQGL LLLAKIENRQ FNESLPIDLS ALLTEKLTDM
EEVLSFKQLA VDVQVQEPFA VLLPASLADS LVTNLVNNAI RHNQTNGRIE LVSTAGELRL
SNTGAPLTTS PERLFERFKK ESPGPDSVGL GLSIIRQIGD SYGLSISYQE TAGIHCFRIT
NH
|
|---|
| |