| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0454 |
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| Symbol | |
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| ID | 8724182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 566015 |
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| End bp | 567727 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003385317 |
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| Protein GI | 284035387 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.219134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA ACGGCGACGC CACGAAAGCA AACACTTACG ACGCCATCGT CATCGGCTCG
GGAATCAGCG GGGGCTGGGC GGCTAAAGAA CTCTGCGAGA AGGGCTTGAA AACCCTTGTG
CTGGAGCGGG GGCGGGATGT GAAACACATT GTCGATTACC CAACGGCCAC GCTCAACCTC
TGGGAGTTTC CGCATCGAAA CCGTATGCCC GAGGCTTTCG ATAAAGAGAA TCCTATTGCT
ACCAAGTGTT ATGCCCTCGA CGAAGGCACC GAGCAGTTCT TCGTGAAAGA TGCCGAGCAC
CCCTACGTGC AGGAGAAGCC GTTCGACTGG ATTCGGGGCT ATCAGGTGGG CGGAAAATCG
CTGATCTGGG CACGGCAAAC GCAGCGGTGG AGTAAGTTCG ATTTTGAAGC CAACGCCCGC
GATGGAGCCG CCGTCGACTG GCCTATTCGC TACGAAGATA TTGCCCCCTG GTATAGTCAT
GTCGAGAAAT TTGTGGGTAT TAGTGGCAAT AAAGACGGTT TGGAAACCCT GCCTGATGGC
GAGTTTCTGA AACCCTGGCA ACTCAACTGC GTGGAGAAAC ATATTCAGAA ACGCGTTTCG
GAAAGCTACC GAGACCGGCA TGTGATCATT GGCCGGTGTG CTCACCTCAC AGAACCCAAA
CAGATTCACT ACGACCAGGG ACGGGCGCAG TGCCAGGCCC GGCATTTGTG CTACCGGGGG
TGCCCGTATG GCGGCTATTT CAGCAGTAAC TCGTCTACGA TTCCTTGGGC GGCCAAAACG
GGAAAACTCA CGCTTCGGCC GGATTCGGTC GTGCATTCCA TTATCTACGA CGAGATCAAG
AAGAAGGCGA CGGGCGTTCG GGTAATTGAC ACGCATACCA AACAGATGAC GGAGTATTAC
GCCCGCATCA TTTTCGTCAA TGCCGCCTGC CTGAACACCA ATTTGGTATT ACTGAACTCA
ACTTCCCGGC GCTTCCCGAA TGGACTGGGT AACGATAGTG GTGTACTTGG CCGCTATGTC
GCTTTCCACA ATTACCGGGG CAACATCGTG GCCGATTATG AAGGATTTGA GGACGGGTAT
TATTACGGCC GTCGCCCGAC AACGGCGTTT ATGCCCAACT TCAGAAACGT TGGTAAGCAG
GAAACCGATT TTCAGCGCGG CTACATGGTT GCGTTTAGTG CCGCTCGTGG TGGCTGGAGC
CGGGGAGCGG GGCAGGAAGG CTTCGGAGCC GACTTCAAGG ACAAACTGAG CGACCCCGGT
GCCTGGCACG TGTTCATGAT GATGCAGGCC GAAACGGTGC CGCGTTACGA AAACCACGTG
CGGCTTAGCA CCGATCAGAA AGATTCGTGG GGAATTCCGC AACTGGTAAC CGCCATCGAC
TACACAGATA ATGATGTAAA GGTGATGAAG GACTTTCTGC AACAGGGAGC CGAGATGCTG
GAGAAGTCGG GCTGTAAGAA CATTAACCCG TACGACGACC ACCGGAACCC TGGCCTCGAT
ATTCATGAGA TGGGTGGTGT GCGCATGGGC CGCGACCCTA AAACGTCGAT GCTCAATGCC
CATAACCAGC TCCATAACGT GAAGAACGTG TTCGTAACCG ATGGCGCGGC TATGACCTCT
ACCGGTTCGC AAAACCCGTC CATTACCTTC ATGGCGCTCA CTGCGCGGGC CGCGAACTTC
GCCGTTAGTG AACTCAAAAA AGGAAATCTG TAA
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| Protein sequence | MNINGDATKA NTYDAIVIGS GISGGWAAKE LCEKGLKTLV LERGRDVKHI VDYPTATLNL
WEFPHRNRMP EAFDKENPIA TKCYALDEGT EQFFVKDAEH PYVQEKPFDW IRGYQVGGKS
LIWARQTQRW SKFDFEANAR DGAAVDWPIR YEDIAPWYSH VEKFVGISGN KDGLETLPDG
EFLKPWQLNC VEKHIQKRVS ESYRDRHVII GRCAHLTEPK QIHYDQGRAQ CQARHLCYRG
CPYGGYFSSN SSTIPWAAKT GKLTLRPDSV VHSIIYDEIK KKATGVRVID THTKQMTEYY
ARIIFVNAAC LNTNLVLLNS TSRRFPNGLG NDSGVLGRYV AFHNYRGNIV ADYEGFEDGY
YYGRRPTTAF MPNFRNVGKQ ETDFQRGYMV AFSAARGGWS RGAGQEGFGA DFKDKLSDPG
AWHVFMMMQA ETVPRYENHV RLSTDQKDSW GIPQLVTAID YTDNDVKVMK DFLQQGAEML
EKSGCKNINP YDDHRNPGLD IHEMGGVRMG RDPKTSMLNA HNQLHNVKNV FVTDGAAMTS
TGSQNPSITF MALTARAANF AVSELKKGNL
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