Gene Slin_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0425 
Symbol 
ID8724153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp529305 
End bp530555 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content55% 
IMG OID 
Productgamma-glutamyl phosphate reductase 
Protein accessionYP_003385288 
Protein GI284035358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.892437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCAA TTACGCCACT CCTCCAGGCT GCTCAGCAGG CTGCGGCAGC CGTTCGGCGG 
CTTAGCCCCG ACCAGAAAAC CGATTTATTG AATCGGCTGG CCGATGTTCT GGCTGCCCAT
TCCGCCACGA TCGTCGCCGA GAATCAAAAA GATCTCGACC GCATGGACGC TGCGGACCCT
AAATACGACC GGTTGAAACT GACCGAAAGT CGCGTGGCAG ACCTCTCCAA AAGCTTGCGG
GAGGTGGCCG TGTTACCCGA CCCGGCCGGC GAAGTTATTC TGGATCGAAC CATTGAGCAG
GGGTTGAAAC TCAAAAAAAT TGCTGTTCCG CTGGGTGTGG TAGGTGTCAT CTACGAAGCG
CGTCCCAACG TAACTGTCGA CGTAGCTTCG CTTTGTCTTC GATCGGGCAA TGCGTGTGTA
TTGAAAGGTG GCAAAGAGGC CGACTTCTCC AATCGGTACC TGATTAGTCT GATTCAAGGG
GTACTGGTCG AGTTTGGCGT ACCCAAATCC GCTGTCACCC TCCTCCCCCC CGATCGGGCC
GTGGTGAATG AATTGCTTAC CGCCACCCGA TATGTCGATA TTATTATTCC TCGCGGGTCG
GAGTCGCTGA TTCAGTTCGT CCGAAAAAAC TCGCTGGTGC CCACCATCGA AACCGGGGCT
GGTGTGTGCC ACGCTTACGT TGAGCAAACG GCCGACTTAG ACAAAGCAGC CGCCATTGTG
GTGAATGCCC GCGTCTCGCG CCCATCGGTC TGTAACTCCC TCGACTGCGT GTTGGTTGAT
GAAGCCATCG CCGACCGTTT CCTGCCCATG CTTACCGCCG ACTTTACCAA GTGGAATGTG
GAAGTATTTG CCGATGAAAC CTCGTATGGC ATTTTCGAGA AAGCCGGTTA TACAAACCTC
CAACATGCCC GTCCCGAAGA TTTTGGCCGC GAGTTTCTGG ACTACAAATG TGCGGTAAAA
GTAGTTGCTG GACTGGACGA AGCCCTTTCC CACATCCAAA CCTACTCGTC GCGTCATTCC
GAAGCCATTT TATCGCAGAA CCAATCGTTT ATCGACCAGT TCCTCAGCGA AGTTGATGCA
GCAGCTGTAT ACGCCAACGC GTCGACGCGC TTCACCGACG GTGGTGTGTT TGGCCTAGGT
GCCGAGATAG GTATTTCGAC CCAGAAACTC CACGCCCGTG GGCCTTTTGC ACTGGAAAAG
CTGGTGACGG AAAAATGGAT TGTGGTGGGC GACGGGCAGG TAAGGTGGTA G
 
Protein sequence
MTPITPLLQA AQQAAAAVRR LSPDQKTDLL NRLADVLAAH SATIVAENQK DLDRMDAADP 
KYDRLKLTES RVADLSKSLR EVAVLPDPAG EVILDRTIEQ GLKLKKIAVP LGVVGVIYEA
RPNVTVDVAS LCLRSGNACV LKGGKEADFS NRYLISLIQG VLVEFGVPKS AVTLLPPDRA
VVNELLTATR YVDIIIPRGS ESLIQFVRKN SLVPTIETGA GVCHAYVEQT ADLDKAAAIV
VNARVSRPSV CNSLDCVLVD EAIADRFLPM LTADFTKWNV EVFADETSYG IFEKAGYTNL
QHARPEDFGR EFLDYKCAVK VVAGLDEALS HIQTYSSRHS EAILSQNQSF IDQFLSEVDA
AAVYANASTR FTDGGVFGLG AEIGISTQKL HARGPFALEK LVTEKWIVVG DGQVRW