Gene Slin_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0357 
Symbol 
ID8724085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp453679 
End bp454452 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content49% 
IMG OID 
ProductNUDIX hydrolase 
Protein accessionYP_003385220 
Protein GI284035290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCGC AGGAAGAAAT AAATGACTTT GTCAGGGACG GGTACAAACA ATATTTACCG 
CATCTGACCA TCGACCCGGT CATTTTTGGC TACCACGATC AGCAACTGAA GATTTTACTC
CTCAAATGGA TTGGCTATGA CGGCTGGGGA TTGCCCGGTG GGTTTATCAA ACGCCGGGAG
TCACTGAGCG AGGCTGCTCA CCGCATCTTA CAGGACCGAA CGGGCCTGGA GTCTGTATTT
CTTCAACAGT TTCAGGTCTT CGGAGATTCG CCGTATCGGG TCAAGGAGCG AAGCCCCGGT
GAGGTGTCCG GGAAATATGG CTTTGTCGTG GAGGACAGCT GGCTGTTTGA GCGAACCTTG
TCAATTGGCT ATTTCGCTCT GGTCGACTAC TCAAAGGTGA CGGTAACGAC CGATTTCTTT
ACTAATGCTC ACCAATGGTG CGATGTAAAC GAAGTCCCTG CATTGTTATT CGATCAGAAT
GAAGTGGTTG ATAAAGCGCT GATAACACTC AGGCACCAGA TTTATCACCA GCCAATTGGA
TACAATCTGC TCCCCGAAAA ATTTACGCTC CCCGAAATCC ATAAACTGTA TGAGACTATT
CTGGGGAAAG AACTGGACCC GCGGAATTTC GCCAAAAAGC TGGTGGTACT GGGGTTAATT
AAAAAGCTGG ACGAACAGCG GGCTATTGGC CCTCACCGGT CACCCTACCT CTATCAGTTT
GAGAAAGAAG CCTACGAATA TGCCCTGAAG CATGGCATTG TGCACACTTA CTGA
 
Protein sequence
MNSQEEINDF VRDGYKQYLP HLTIDPVIFG YHDQQLKILL LKWIGYDGWG LPGGFIKRRE 
SLSEAAHRIL QDRTGLESVF LQQFQVFGDS PYRVKERSPG EVSGKYGFVV EDSWLFERTL
SIGYFALVDY SKVTVTTDFF TNAHQWCDVN EVPALLFDQN EVVDKALITL RHQIYHQPIG
YNLLPEKFTL PEIHKLYETI LGKELDPRNF AKKLVVLGLI KKLDEQRAIG PHRSPYLYQF
EKEAYEYALK HGIVHTY