Gene Slin_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0340 
Symbol 
ID8724068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp434355 
End bp435458 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385203 
Protein GI284035273 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000105714 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.776325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCT TTCAATTTTC TGATTACATA CCACCCGAAC AAAAGGAAGG CAGCAAATTT 
GACCAGTTGC TGAATATCTT CCAGCAGTTA CTGCTTCTTA CCTCCGGCGA CGTAGAACAG
GCGATGGCCT GGATGAGCCA GCTCGACCGG CAATATGGCC TCACCGATGA CAAATACGGC
ATCGGTAACT TCTTCGACGA CCTGAAAGAA AAAGGCTATC TGACCGAAGA AAACCAGGAA
GGCAAGATCG TTATGACGCC CAAAAGCGAA CAAACGATTC GGCGCAGCGC TCTGGAAGAA
ATTTTCGGAA AACTCAAACG ATCTAAATCG GGTGGGAATC ATAATACGCC CTATACTGGA
ACAGGCGACG AACTAAGCAG CGACCTGCGC ACGTATCAGT TTGGCGATAC GCTGGAACAG
ATTTCCATGA CCGAATCCAT CAAAAACGCG CAGATTAACA GCGGAGTTGA GGAGTTCCGA
CTCATGGAGC GCGACCTGGA GGTGACGGAA AAGGAGCAGA AAACACAAAC GTCGACGGTG
CTGATGATCG ACATTAGCCA CTCGATGATT CTGTACGGCG AAGACCGCAT TACACCCGCT
AAAAAGGTTG CCCTTGCGCT GGTTGAACTT ATCAAACAGA AATACCCTAA AGACACGCTC
GACATTGTGG TGTTTGGTAA CGATGCCTGG CAGATTCAGG CTAAAGAGCT TCCCTATCTG
GAAGTTGGCC CTTACCACAC CAATACGGTA GCCGGACTTG AACTGTCTAT GGACCTGCTG
CGTCGGCGGA AGAACAAGAA CAAGCAGATA TTCATGATCA CCGACGGCAA ACCGACCTGT
TTGAAAGAAG GGATCAAATA CTACAAGAAC TCATTCGGAC TCGACCGCAA AGTCGTTAGC
AAAACTCTGA CATTGGCCGC CCAATGCCGT CGGCTGGAGA TTCCTATCAC GACGTTCATG
ATTGCTTCAG ACCCCTACCT CAAGCAGTTT GTGCAGGAGT TTACCAAAGT AAACAATGGC
CGGGCTTATT ACAGTGGTTT GCAGGGTTTA GGCAATATGA TGTTCGAGGA CTTCCAGCGC
AACCGCCGGA AAAACATTAA ATAA
 
Protein sequence
MKGFQFSDYI PPEQKEGSKF DQLLNIFQQL LLLTSGDVEQ AMAWMSQLDR QYGLTDDKYG 
IGNFFDDLKE KGYLTEENQE GKIVMTPKSE QTIRRSALEE IFGKLKRSKS GGNHNTPYTG
TGDELSSDLR TYQFGDTLEQ ISMTESIKNA QINSGVEEFR LMERDLEVTE KEQKTQTSTV
LMIDISHSMI LYGEDRITPA KKVALALVEL IKQKYPKDTL DIVVFGNDAW QIQAKELPYL
EVGPYHTNTV AGLELSMDLL RRRKNKNKQI FMITDGKPTC LKEGIKYYKN SFGLDRKVVS
KTLTLAAQCR RLEIPITTFM IASDPYLKQF VQEFTKVNNG RAYYSGLQGL GNMMFEDFQR
NRRKNIK