| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0335 |
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| Symbol | |
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| ID | 8724063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 427440 |
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| End bp | 430394 |
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| Gene Length | 2955 bp |
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| Protein Length | 984 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003385198 |
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| Protein GI | 284035268 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.16291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.953666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAA CGATAATTAA CACCGGCAAA CGGACCACCC GTTTGCCGGG TCTGTTCAAC
CTGTGCGTTA ACGCAGGTCT GTTGCTGGGA CTGGCTTCGT TTGTGATGCA AGACGGCTCC
ACCAAACCCG ACGAAACCCG GTTTACGCCA GTTGTGCTGG CCGAAGACCT CGATGAGCCG
ATGGTGTTTG AGGTTGCCAA AGACGGAACG GCCTTCATTA TCGAGCGCAA AGGAGCCTTG
AAAAAATATG ATCCGGTCAC GAAAACGGTC GATCTGATCG CGACCATCCC GGTCAATACG
AAATACACCT CGGCACAGGG GCGCGTGTCG GAAGCTGAAG AAGGGCTTCT GGGCCTGTCG
CTGGACCCCA ATTTCGAGCA GAATCACTGG ATGTATCTGT ATTACGCGCA CCCAACCGAG
AAGAAACACA TCCTGACGCG CTGGGAGTAC CGCAACGAAA AACTGGTCGA GAACTCGCAG
AAAGTGATGC TGGAAGTAAC AACCCAGCGT GAAGTGTGCT GCCATACGGG TGGTGGAATG
ACCTGGGATC GGGCGGGTAA TCTGTACCTC ACCGTAGGTA ACAACACCGG AAACCAGCAG
GCTGCCCAGA CCGACGAACG CCCCGACCGC AGTAGTTGGG ACGATCAGGG CCATGCCGGC
AACACCAACG ACTTACGGGG AAAAATCCTC CGGATTCATC CCGAAGCCGA TGGTACGTAC
TCCATTCCGG AAGGAAACCT GTTCCCAAAA GGCACCGAAC CGTCGGACCG CGCCAAAACC
CGCCCCGAAA TTTACTCTAT GGGGCATCGT AATGCCTGGC GTATTTCAAT CGACAGCCAG
ACGGGTTATG TGTACTGGGG CGAAATCGGT CCCGATGCGA CCAAGGATTC TGAAATTGGT
CCGCGTGGTT ACGATGAACT AAACCAAGCC CGCAAGCCGG GCAATTTTGG TTGGCCGTGG
TTCGTAGGAA ACAATCAGGC ATTTCCGGTG TATGATTACG CCAACAAGAA GCCACTGGAG
AAAAAAGATC CGAAAAACCC GGTTAACAAT TCGCCTAATA ATACCGGGCT GACGAATCTG
CCGCCAACGG CTCCTTCGTT TATTTATTAC CCATACGCGG TTTCGGAAGA GTTTCCACTG
GTGGGAACGG GTTCACGGTC GGCAACGGGC GGGCCGGTTT ATCGCCAGGC CGACTTTAAA
GGGGCCAAGC GGCCCTGGCC AGCGTATTAC GAAGGGAAAT GGCTCGTTAC TGACTTTTCC
CGAGGCTGGA TTATGGCCGT TTCTATGGAT GCCGAGGGGA ATTACAAGGG TATGGAGCGG
GTTCTGCCTA CTTATCACCC GGTGGAGCCC ATCGACATGA AGTTTGGCCC CGACGGCGAC
CTGTACGTAC TCGAATACGG TAGCAACTGG TTCCGAAAAA GCGACAATGC CCGCCTTGTC
CGGATTGAGT ACAACAGTGG CAACCGGAAG CCAATTGTGC AGGCATCGGT AGCGACGAAT
CAAGGCAGTA AGTCGGGCGG TACGTTGCCG CTTCAGGTCA CATTATCGGC CGATGGGAGC
AAGGATAATG ATGGCGATGC GCTCAGCTAC CAGTGGAAAG TGACCTCGCC GGGTATTGCC
CCAAAGGTGT TTACGACTGC TAATCCCACC GTTACCTTCG ACAAAGCCGG TGTTTACACC
GCCACGCTGA CGGTCACGGA TGCGCATGGT GCCGCTAACA GCCAGTCGGT ACGCATCATT
GCCGGAAACG AAGCACCCGT TGTCGCGGTG AATCTGACAG GAAATAAAAC CTTCTTTTTC
CCCGATCAGC CCATTCAGTA CGCAGTCAAT GTGTCGGATA GGGAAGATGG TACCCTGGCT
AAATCAACCG CTGCTCCGGG CCAGATAAGT CCGGCTCGGG TGGCTATGAG CATCGACTAC
ACCTCCGAAG GCTTCGATTA TGCCGAAGTA ATGCAGGGGC AGCGGAGCGT CGATGCGTCT
ACGCAATATG CTGTGGCACA GGCGCTGATT AGCCAGAGCG ATTGTAAAGT ATGCCACCAG
ATCGACACCA AGTCGGTGGG GCCTGCCTTC ACTGCCGTTG CCGCTAAATA CAAGGGAGAC
ACCGGAGCAC CGGCGCGACT CGTCAGCAAA ATCCGACAGG GTGGTGTAGG CGTCTGGGGC
GATGTTGCCA TGCCTGGTCA CCCGGCCATG TCGGTTGCCG ATGCGGGTAT TCTGGTGAAC
TATATTCTGC ATATCAACGA AAAAACGCTC AGCAGCTTAC CCATGGAGGG TACCTATACC
CTGAAAATTC CGGAAGGCGA CAAAGGCAAC GGGTCCGTAC TGATTCGGGC GGCTTACACC
GACCGGGGCA AGGCAGCCGC TAAAGGCGGC AAGCCTGTAC CGGCCCAGAC CAGTGAGCAG
TTACTGGTAC TGCGCAGCCC ACAACTCGAT GCGTCTACCG CTGCGATTAT TCGTGGTGCA
GAGGTAAAAG CTAAAGGTAT GGGCAAAGGG GAGAATGTGA TTCCATACGC AAACAGCTAC
ATCGGTTTCC GGAAGCTGGA TCTAACGGGT ATCAAGCAGC TTGAACTGAC GGCGTCGGCA
CAGCGACGCG AAGGAAGTTC GGGCGGTACC ATCGAGGTTC ACCTCGACTC GCCCACCGGC
CCCCTCGCTG GTGAAACAGT TGTTGAACTG GCACCGGAAG TGGACATGGA AAAGCTGATG
GCTCAGCTGG AAGCCGGACC GAAACCACCC GCCGGTGGTG CCAATGGTTC GGCAGCAACA
CCCGGTGGCC CTGCTGCTCC CGGCGAACCT GCTAAACCCC GGCCCAATCC ATTTGCTCGG
CCCCCTGTGT ACCTGACGCT GAAAAATGCG GAGGGTGTTC ACGACGTGTA TTTTGTCTTT
AAAAACGATC AGGCAAAAAA CATACAGCCG TTAATGTCGC TGTCGAGCAT TAAGTTTATG
AATAAAGAGA AGTAA
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| Protein sequence | MRKTIINTGK RTTRLPGLFN LCVNAGLLLG LASFVMQDGS TKPDETRFTP VVLAEDLDEP
MVFEVAKDGT AFIIERKGAL KKYDPVTKTV DLIATIPVNT KYTSAQGRVS EAEEGLLGLS
LDPNFEQNHW MYLYYAHPTE KKHILTRWEY RNEKLVENSQ KVMLEVTTQR EVCCHTGGGM
TWDRAGNLYL TVGNNTGNQQ AAQTDERPDR SSWDDQGHAG NTNDLRGKIL RIHPEADGTY
SIPEGNLFPK GTEPSDRAKT RPEIYSMGHR NAWRISIDSQ TGYVYWGEIG PDATKDSEIG
PRGYDELNQA RKPGNFGWPW FVGNNQAFPV YDYANKKPLE KKDPKNPVNN SPNNTGLTNL
PPTAPSFIYY PYAVSEEFPL VGTGSRSATG GPVYRQADFK GAKRPWPAYY EGKWLVTDFS
RGWIMAVSMD AEGNYKGMER VLPTYHPVEP IDMKFGPDGD LYVLEYGSNW FRKSDNARLV
RIEYNSGNRK PIVQASVATN QGSKSGGTLP LQVTLSADGS KDNDGDALSY QWKVTSPGIA
PKVFTTANPT VTFDKAGVYT ATLTVTDAHG AANSQSVRII AGNEAPVVAV NLTGNKTFFF
PDQPIQYAVN VSDREDGTLA KSTAAPGQIS PARVAMSIDY TSEGFDYAEV MQGQRSVDAS
TQYAVAQALI SQSDCKVCHQ IDTKSVGPAF TAVAAKYKGD TGAPARLVSK IRQGGVGVWG
DVAMPGHPAM SVADAGILVN YILHINEKTL SSLPMEGTYT LKIPEGDKGN GSVLIRAAYT
DRGKAAAKGG KPVPAQTSEQ LLVLRSPQLD ASTAAIIRGA EVKAKGMGKG ENVIPYANSY
IGFRKLDLTG IKQLELTASA QRREGSSGGT IEVHLDSPTG PLAGETVVEL APEVDMEKLM
AQLEAGPKPP AGGANGSAAT PGGPAAPGEP AKPRPNPFAR PPVYLTLKNA EGVHDVYFVF
KNDQAKNIQP LMSLSSIKFM NKEK
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