Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0308 |
Symbol | |
ID | 8724036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 398165 |
End bp | 399556 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | Alpha-L-fucosidase |
Protein accession | YP_003385171 |
Protein GI | 284035241 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATCGT ATTTTACATT TAATGGTATG AATCGTTTTC TATGCACAGT AGTGTGTACT CTATTGTTGC TAAGTTCATT CGTTTGTTAC GCACAGGAAA AAAAAGGTGT AGTCCAACCT ACACCTCGGC AGCTTGCCTG GCAACCTCTG GAAACAACGG CTTTTCTGCA TTTTACCGTA AATACATTTA CGGATAAGGA GTGGGGGGAT GGAACCGAAA GCCCGGCAAT TTTTAATCCG ACCAAACTGG ATGCCCGGCA ATGGATCAAG GCCCTGAAAG AAGCCGGATT CAAAATGGCC ATTATCACTG CCAAGCACCA TGACGGATTT TGTCTCTGGC CATCAAAAAT GACCAATCAT TCCGTTAAGA GCAGCCCTTG GAAAAATGGT AAAGGAGATG TAGTAAAAGA AGTAGCCGAT GCCTGCCGCG AATTTGGTCT GAAATTCGGC GTTTATCTGT CGCCCTGGGA TCGGCACGAA CCCCGCTATG GCACGGCTGC TTACAATGAC TTTTATAAAA GTCAGCTCCG TGAGTTGCTC ACCAATTACG GACCCATATC CGAAGTTTGG TTTGATGGGG CTAAAGGCGA AAATGCTAAA GATATGACCT ACGATTTTGC CGGTTACTGG GCGCTGGTTC GGCAATTACA ACCCAATGCG GTTATGTTTT CCGATGCCGG GCCCGACGTT CGCTGGGTGG GTAACGAAGC CGGTAATGCC GGTGAAACAT GCTGGTCTAC CATCAATACG GAAGGGCTGG CACCCGGTAA GGCCGATCCA GGATATTTAA ACCGGGGTGA TGCCACCGGC AGGCAATGGG TACCGGCCGA AACGGACGTG TCTATTCGGC CGGGATGGTT TTATCACCCG TCCGAAGATT CGAAAGTACG TTCGGCCCAG AATCTGGTGA ACCTGTACTA TCAGTCCGCA GGCCGTAATA GCCTGTTGTT ACTGAATGTT CCACCCAATC GGGATGGGTT GCTTTCAGAA CCGGACATCG CTAGCCTTCG GGAATTCAGA CGTATTCTTG ATGAGACCTT CAAACAAAAT CTGGTTGGCG GGCAGCCGTC TTTAACCGAT AAAAAACTGA CGACGTTTAC CACATTATCG GCTAATCAGC CCCTTGTCAT TAGTTTGGGC GCAGAAAAAT CGTTCGACCG AATGGCCATT CAGGAAAACA TCGCCAACGG CCAACGTATT GCCAGCGGTC GGGTCGAGTA CTGGGACGGC TCGAACTGGA AGCCGCTCCA GACATTTACG ACTGTAGGCT ATAAACGGCT TTTACGCTTT CCGGCTGTTA CGTCGTCTAA ATTGCGGTTG TTGATTTCTA ACGCCAATGG GCCGGTACAA CTGGCCGAAA TCGGGGTATA TAAAGCTTCG TCCGGGGAGT AA
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Protein sequence | MLSYFTFNGM NRFLCTVVCT LLLLSSFVCY AQEKKGVVQP TPRQLAWQPL ETTAFLHFTV NTFTDKEWGD GTESPAIFNP TKLDARQWIK ALKEAGFKMA IITAKHHDGF CLWPSKMTNH SVKSSPWKNG KGDVVKEVAD ACREFGLKFG VYLSPWDRHE PRYGTAAYND FYKSQLRELL TNYGPISEVW FDGAKGENAK DMTYDFAGYW ALVRQLQPNA VMFSDAGPDV RWVGNEAGNA GETCWSTINT EGLAPGKADP GYLNRGDATG RQWVPAETDV SIRPGWFYHP SEDSKVRSAQ NLVNLYYQSA GRNSLLLLNV PPNRDGLLSE PDIASLREFR RILDETFKQN LVGGQPSLTD KKLTTFTTLS ANQPLVISLG AEKSFDRMAI QENIANGQRI ASGRVEYWDG SNWKPLQTFT TVGYKRLLRF PAVTSSKLRL LISNANGPVQ LAEIGVYKAS SGE
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