Gene Slin_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0289 
Symbol 
ID8724017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp380874 
End bp381281 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content44% 
IMG OID 
ProductWxcM domain protein 
Protein accessionYP_003385152 
Protein GI284035222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.213456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAC TTTACGAATT AACAACATAC GAATCCGATA CGGGAAACTT AACCGTTTTT 
GAGAAAATTA TTCCTGGAAT AATTCAACGC GTCTTTTATA TTTACGAAGC TGGTAATAGC
ACTCGTGCGG GTCATCGACA TCATCAGGCC TGGAATGCAC TTATCTGCCT GAGGGGTAGC
TGCCGGGTTT ATAACAACGA TGGCATAGAG GAAGAGGTGA TTCGTCTGGT GACTCCACGC
CAATGTCTGG TTCTCGAACC TAAAGACTGG CATAGCATGG ATGAGTTCTC CGACGATGCT
ATTCTGCTGG TCGTTTCAAA TGAGTTGTAC GATAAAGACG ATTACATTTA CGAGCCTTAT
CCGAACGGCC AAATGGAGAA TAGTCTACTT ATGGCTGCTT CTGAATGA
 
Protein sequence
MAKLYELTTY ESDTGNLTVF EKIIPGIIQR VFYIYEAGNS TRAGHRHHQA WNALICLRGS 
CRVYNNDGIE EEVIRLVTPR QCLVLEPKDW HSMDEFSDDA ILLVVSNELY DKDDYIYEPY
PNGQMENSLL MAASE