| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0277 |
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| Symbol | |
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| ID | 8724005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 363888 |
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| End bp | 367178 |
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| Gene Length | 3291 bp |
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| Protein Length | 1096 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003385140 |
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| Protein GI | 284035210 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.97163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.971813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAT CGTTCTACAG ATTTCTGCAG ACCGCTTTTC TGGGTACAGT ATTATTACTG
TGGAGCTTGA ACGCTTCCGC CCAGGACCGT CGCCTAACGG GTAAAATCAC GGGCGTTGAT
GGACCGGTAC CCGGGGCCAA CGTTGTACTT AAAGGTACCC AAACGGGTAC TGCCACTGAT
GCTGACGGCA ACTATGCGCT GAACATTCGG GGTGCTAGCC CGGTGCTGGT GATATCAGCC
ATTGGCTTCA AAACTCTGGA AGTAGCTGTA GGTAACCGCA CGTCGGTTGA CGTAAAGCTC
GAAGACGACG CCACCGCCCT GAGCGAGGTT GTTGTAACAG GTTATTCGAC AGAAAACCGT
CGGGATGTAA CCGGCGCAGT ATCTACCGTA AAGCCCGCCC AACTGAAAGT TGTGCCATCA
ACAAACGTTG AACAGCAATT GCAGGGCCGG GTAGCTGGTG TAACCGTTAT TACAAACGGC
CAGCCTGGTA CGACTAGCCA GGTTCGGGTA CGGGGTTTTG GTTCGTTTGG TGGTAACCAG
CCTTTGTACG TTGTTGATGG TGTACCAACC CAGAGCATCC AGTACATTGC TCCGGATGAT
ATCGAGTCAA CTACGGTTCT TAAAGATGCG GCTTCGGCAT CCGTTTATGG AGCACGTGCT
GCATCGGGCG TTATTGTATT GACAACCAAG AAAGGCCAGC GCCGGGCTCA GAAACTGAGC
ATTAGCTACG ATGGCTTGTA CGGTGTTACC GACCCAGGTC ATGGTCAGAA AATTCTGACG
CCACAGGAAC AGGCTGACTG GACCTGGCAG GCCCGCAAAA ACGATATTTT TCAGGCTGGC
GGAACAGTTG GTCCAACTAG CTTTACGGGT ATTGCTAATG GTCAGTACGG ATCGGGACAA
ACACCTGTTC TGCCAGATTA TTTGCTGGTA GGCAACCAGA CAGGCGTATC AGCATCTGCA
GTAAACCTGG AAGCAGAGCG TGCAAAGTAT AACATTAACC CTGCCAATGG AGCCATTTAC
AATGTTATTC CCGCCAACAA GGCAGGAACA GACTGGTATG GTGCCATCAC TCGCGTAGCT
CCCCTGATGC GTCACACACT GGGCTTCTCC GGTGGCACAG AGTCGAGCCG GTTTTACCTA
AGTCTGGGTA TGCAGAAACA AGCTGGTATT ATCACCTACA ACGACTTCTC GCGTTATACG
TTACGCGTGA ACACGGAATT TGATATTACA AAGAAACTGC GGTTTGGCGA GAACGTGCAG
TTGGCCTATG TTTCGGCAAC GGGTCTGCAG GGTAGCACAG GAAGCACACT TGGTAATGGC
ACCAACAATA ACTCCAGCGT TGCGGCCGAT GAAAACGATA TCCTCCTGGC GTTTCGTCAG
GCACCGATCA TCCCTGTATA CAACGCATTC GGTGGTTATG CAGGTACAGC AGCATCGGGC
TTTAACAACG CCCGGAACCC GGTGGCTAAC CGTATCGGAG CGAAGGACAA CATCAACTAC
AACCTGATTG CGTTTGGTAA TGCTTACCTG GAGTATGATG TCATTCCGGC GTTAACACTG
CGCAGTAGCC TGGGCGGTAC CTATTTCAGC AACTACAACA ATGCGTATAA CCGGTCTCAA
TACGAAAACT CGGAGAACAA TACGAACTAT GTATATAACG AATCGTCGAA CGTTGGGTTA
GCCTGGACGT TCACCAATAC GGCTCAGTAC AAACAGAAGT TTGGCATTCA TGATGTTAGC
GTTCTGGCAG GTATCGAAGC GTTGAACACA GGAAGCGGTC GGGGTATCAG TGGCTCCGGA
CTGAACCCAT TCACGACAGA TCCAAACTAC GTAACCATCG GCACGACAAC GCCGGGCGCT
ACGCGTAGTG TAAATAGCTA CTACGGCAAG GGCAATAACT TCTATTCTTT GTTTGCTCAG
GCGCGTTATA CGTTCAATGA CAAGTATATC CTTACGGGTG TAGTTCGTCG GGATGGTTCG
TCGCAATTTG GTTCTCAGAA CCGCTACGGG GTATTCCCCG CTGTTTCGGC GGCCTGGCGT
CTGTCATCCG AAGATTTTAT GAAGAACCTG CCGTGGGTAT CTGATTTGAA AGTACGTGGT
GGCTATGGCT TGATGGGTAA CTCGAACTAC CTGAGTTCGA CAAACCAGTA CAATCTGTTT
GGTTCCAATG CAGGTAACAG CTACGACATT ACAGGGGCCA ACACATCGGT ACAGGCCGGT
TACTACCGTA GCCAGATTGG TAATGCTGCC GCCAAGTGGG AAACCAGTAT CACGTCAAAC
GTTGGTATAG ACGGTGCTTT CTTTAACAAC AAGTTAGAAG TAGTTCTTGA TTTCTGGCAG
AAAGACACAA AGGACCTGCT CTATCCGCTG GCTCTCCCGG GCGTAGTTGG TGTTCGTGCC
AATGCTCCTT ACGTGAACGT AGCCAGCATG CGCAACAAAG GTATTGACCT CCTCATTACA
ACGCGGGGTA ACGTAGTTGG CGATCTGGGC TATGAGGTTA CAGCCGTTGG AAGTATCCTG
GATAACAAGA TCACAGCCAT TGCGCCATCG GTACCTTACT TCACCGCCAA TGGTCAGCGC
TTAAGCTCTC CTGTTGTTCG TAACCAGCCT GGTCATGATC TGTCGTCTTT CTATGGCTAC
AACGTAATTG GTCTCTTCAA CAGCAAAGCA GAAGTTGATG GTGCTCCTAC GCAACCGGGT
GCGGCTCCGG GTCGTTTCCG TTACCAGGAT ATTAACGGTG ATGGTAAAAT CGACGACGCC
GACCGTACAT TCCTGGGAAG CCCGATTCCT AAGTTTACGG GTAGCCTGAC GCTGACGCTG
AAGTACAAAG GATTCGACCT GAACACACAG GTGTATGCGT CGCTTGGTAA CAAGATCTTT
AACAACTCGA AATGGTACAC CGACTTCTAT CCTTCGTTCC CGGGGGCGGC TGTTAGCCAG
CGTGTGAAAG ATTCGTGGTT GCCAACGCAT ACCGACACGA AAGTGCCCAT TTTTGAGAAC
ACCTCAAACT TCAGCACAAA TACGGAGTCG AACTCCTACT ACGTAGAAAA CGGCTCGTAT
GGCCGGATGC AGTACCTGAC GCTGGGCTAT ACCTTCCCAG CCTCCGTGCT GAACCGGGCT
AACCTGAGCC GGTTAAGACT GTCGCTGTCT GCTACGAACC TGTTCACAAT TACGAAGTAT
TCTGGTTTGG ATCCAGCCGT TGGCGGCTCG GCTGACCAAA ACTTCGGTAT CGACATCGGT
AACTATCCCG TTACCCGTGG CTATAACGTA GGCTTGAGCT TCGGCTTCTA A
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| Protein sequence | MKASFYRFLQ TAFLGTVLLL WSLNASAQDR RLTGKITGVD GPVPGANVVL KGTQTGTATD
ADGNYALNIR GASPVLVISA IGFKTLEVAV GNRTSVDVKL EDDATALSEV VVTGYSTENR
RDVTGAVSTV KPAQLKVVPS TNVEQQLQGR VAGVTVITNG QPGTTSQVRV RGFGSFGGNQ
PLYVVDGVPT QSIQYIAPDD IESTTVLKDA ASASVYGARA ASGVIVLTTK KGQRRAQKLS
ISYDGLYGVT DPGHGQKILT PQEQADWTWQ ARKNDIFQAG GTVGPTSFTG IANGQYGSGQ
TPVLPDYLLV GNQTGVSASA VNLEAERAKY NINPANGAIY NVIPANKAGT DWYGAITRVA
PLMRHTLGFS GGTESSRFYL SLGMQKQAGI ITYNDFSRYT LRVNTEFDIT KKLRFGENVQ
LAYVSATGLQ GSTGSTLGNG TNNNSSVAAD ENDILLAFRQ APIIPVYNAF GGYAGTAASG
FNNARNPVAN RIGAKDNINY NLIAFGNAYL EYDVIPALTL RSSLGGTYFS NYNNAYNRSQ
YENSENNTNY VYNESSNVGL AWTFTNTAQY KQKFGIHDVS VLAGIEALNT GSGRGISGSG
LNPFTTDPNY VTIGTTTPGA TRSVNSYYGK GNNFYSLFAQ ARYTFNDKYI LTGVVRRDGS
SQFGSQNRYG VFPAVSAAWR LSSEDFMKNL PWVSDLKVRG GYGLMGNSNY LSSTNQYNLF
GSNAGNSYDI TGANTSVQAG YYRSQIGNAA AKWETSITSN VGIDGAFFNN KLEVVLDFWQ
KDTKDLLYPL ALPGVVGVRA NAPYVNVASM RNKGIDLLIT TRGNVVGDLG YEVTAVGSIL
DNKITAIAPS VPYFTANGQR LSSPVVRNQP GHDLSSFYGY NVIGLFNSKA EVDGAPTQPG
AAPGRFRYQD INGDGKIDDA DRTFLGSPIP KFTGSLTLTL KYKGFDLNTQ VYASLGNKIF
NNSKWYTDFY PSFPGAAVSQ RVKDSWLPTH TDTKVPIFEN TSNFSTNTES NSYYVENGSY
GRMQYLTLGY TFPASVLNRA NLSRLRLSLS ATNLFTITKY SGLDPAVGGS ADQNFGIDIG
NYPVTRGYNV GLSFGF
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