Gene Slin_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0244 
Symbol 
ID8723972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp322654 
End bp323388 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content52% 
IMG OID 
Productdihydrodipicolinate reductase 
Protein accessionYP_003385108 
Protein GI284035178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00432587 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATATTC TCTTACTGGG CTACGGCAAA ATGGGAAAGA CAATCGAGCA GATCGCGCTC 
GAACGGGGCC ACCAGATTGC GGGCCGCATT GATGCTGATA ACTACGCCGA TTTAGCGAAT
CTCGAACCCG ACGATGTAGA TGTTGTCATT GAATTCAGTT CACCCGAATC GGCAGCCGAA
AACATTACCT ATTGCCTGGA ACGAAACTGG CCGGTTGTAT GTGGCACTAC GGGCTGGCTC
AACCGTCGGC CAGCCATCGA AGCCCTTTGT GAACGTACAA AAGGTGCTTT TTTCTACGCA
TCTAACTACA GCATTGGTGT TAACCTGTTT TTCCGGTTGA ATAAAGTGCT GGCTCAGTTT
ATGCGCAATT ACCCGTCCTA TCATGTGTCG ATGACGGAAA TTCATCATAC CGAAAAGAAA
GACGCTCCCA GCGGAACCGC CATCACCCTG GCCGAAGGGG TTATGGAGCA GCTACCCGGC
AAACAGCGTT GGGTAAGTAA TGAACCCGGT AAAGAACCGC TGCCAGTTGG CGAGGATGCC
ATTGAGATTG AGTCACTGCG GGAAGGTACG GTGCCCGGAA CCCATACGGT TCGTTATGAA
TCGGACGTTG ACCGTATTGA AATTAAGCAC GTAGCGCACA GTCGGCAAGG TTTTGCTCTT
GGGGCCGTTA TAGCCGCTGA GTGGCTGGTT GGCCGTGAAG GCATATTCGG AATGGACGAC
CTGCTGGGGA ATTAA
 
Protein sequence
MNILLLGYGK MGKTIEQIAL ERGHQIAGRI DADNYADLAN LEPDDVDVVI EFSSPESAAE 
NITYCLERNW PVVCGTTGWL NRRPAIEALC ERTKGAFFYA SNYSIGVNLF FRLNKVLAQF
MRNYPSYHVS MTEIHHTEKK DAPSGTAITL AEGVMEQLPG KQRWVSNEPG KEPLPVGEDA
IEIESLREGT VPGTHTVRYE SDVDRIEIKH VAHSRQGFAL GAVIAAEWLV GREGIFGMDD
LLGN