Gene Slin_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0215 
Symbol 
ID8723943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp287935 
End bp288636 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content49% 
IMG OID 
ProductMethyltransferase type 12 
Protein accessionYP_003385079 
Protein GI284035149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.961128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.647581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCA CCTGGCTCGA TTTCTGGCAA CGTGAAAATG AATTCGACGA GTCTATGTCG 
ACGAATTTCA ATTATTTTCT GGAGCGCGTC GAAATGCACA TTCCTTTATC AAAAAACCAT
CGGGTATTAG ACATTGGCTC CGGGCCAGGT AATCTGGAAG ATGCCTGGCA CGACCGCGTA
GCTGAAATGC ATGGTCTGGA TATATCCAAA CGGTATAATG AAATTGCCCG CGCCCGGCAC
GCCGGTTCGC CTACTGTGTG CTTCCATGAT CTTGACCCCG ACGATTATCT GAATTTCGGC
CCGGTAGCCA ATAGACAATT TGATGTGATC ATTGTGATGA GCGTAGTGCA GTACTACCGG
AATCTCAGCG AAGTAGAACA GCTTTTGCAG GCGATCAAAC GCGTGGCTGC CCCGGATGCC
CGTGCTCTTA TATGCGATTT GATGGTGGGA GAGAGCTTTC TGAGCGACGT TTGGGGCATT
CTAAAACGGT CGCTTTTGCA AGGTAAATTA GTTGCTACCC TGAAATTGCT GGTTCGCCTT
CGCTTCTCGC ACTATCATAC GGTTCGCAAG GAAAACGGGT TTTTGATAAT ACCCGAATCT
GAATGGCTGG CCATGTGTGA GCGGGTGGGG CTGAAAGCGC GGTTTATCGA CGAACCGCTT
ACCCTCCAAC AGGAGCGTCG GAATTTACTG ATTAACTTCT AA
 
Protein sequence
MASTWLDFWQ RENEFDESMS TNFNYFLERV EMHIPLSKNH RVLDIGSGPG NLEDAWHDRV 
AEMHGLDISK RYNEIARARH AGSPTVCFHD LDPDDYLNFG PVANRQFDVI IVMSVVQYYR
NLSEVEQLLQ AIKRVAAPDA RALICDLMVG ESFLSDVWGI LKRSLLQGKL VATLKLLVRL
RFSHYHTVRK ENGFLIIPES EWLAMCERVG LKARFIDEPL TLQQERRNLL INF