Gene Slin_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0210 
Symbol 
ID8723938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp282018 
End bp283010 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content50% 
IMG OID 
ProductK channel inward rectifier conserved region 2 domain protein 
Protein accessionYP_003385074 
Protein GI284035144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.467766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.97527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGG CAAACCAACG CCTTTTCAAC CAAACAGACA AAGGCAGTAA TTTAGTTGAA 
CAGGAAGTAC AACGCGACGA CATTGGTTTC GGTACCAAGT TAACAGATTC CCGTTCCCGA
CTTGTCAATC AGGACGGTAC GTTTAACATT GTTCGTGTTA ATGGCACCCT CTGGGACCGG
CTGAACGTTT ATAACCGGCT AATCACCATG GGCTGGCTGC AATTTATGAG CTGGCTTGTA
GTCTTTTACG TGACGGCCAA TACCTTCTTC GCGGGTGTTT ATATGCTGGC TGGCCCCGAC
ATGCTGAAAG CAGCCAGTGA GAAAGCCCTG TATAGTCCGT TCTGGAAATG CTTTTTCTTC
AGTTCACAAA CGCTCACTAC GGTAGGTTAC GGCCATATTG CGCCAGACAG TTTCCTGACC
AGTTCCATTG CCGCCTTCGA ATCGATGGTT GGATTGCTGG CGTTTGCACT GGCTACGGGT
CTGCTTTATG GGCGCTTCTC GCGCTCGGTT GCCCATATCC GCTTTTCAAA ACAGGCCGTT
CTGGCTCCCT ACCTGGACGT TAACGGCTGG ATGTTCCGAA TTATAAATAC CCGGTCCAAC
CAACTCGTCA ATCTGGAAGT AAGCGTGTCT ATGTCGCGGC TGGAACCTCG TGCAGACGGT
ACGCTGTATC GAAAGTATTA CGGCCTTAGT CTGGAACGGA ACAAAGTAGC CTTCTTTCCA
ACCAACTGGA CAATCGTTCA CCCCATCACC CAAAATAGCC CTCTATACGG GTGTACGCCC
GAAGATCTCG AAGCATCGGA TACCGAATTT CTGATTTCGC TGCAGGCCCT CGACGATACC
TTTGTTCAGA ATGTACACAC CCGGTTCTCG TACCGATTCG ACGAAGTCCT CTGGGGTTAT
AAATTTCGGC CCATGTTTGA TGGAACACAG ACTATGCCCA TACAGCTGGA TTTGACCAAA
CTAGACGATG TTCAGGAAGC TCCGCTAAAC TGA
 
Protein sequence
MNTANQRLFN QTDKGSNLVE QEVQRDDIGF GTKLTDSRSR LVNQDGTFNI VRVNGTLWDR 
LNVYNRLITM GWLQFMSWLV VFYVTANTFF AGVYMLAGPD MLKAASEKAL YSPFWKCFFF
SSQTLTTVGY GHIAPDSFLT SSIAAFESMV GLLAFALATG LLYGRFSRSV AHIRFSKQAV
LAPYLDVNGW MFRIINTRSN QLVNLEVSVS MSRLEPRADG TLYRKYYGLS LERNKVAFFP
TNWTIVHPIT QNSPLYGCTP EDLEASDTEF LISLQALDDT FVQNVHTRFS YRFDEVLWGY
KFRPMFDGTQ TMPIQLDLTK LDDVQEAPLN