Gene Slin_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0196 
Symbol 
ID8723924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp261062 
End bp261949 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content53% 
IMG OID 
ProductNmrA family protein 
Protein accessionYP_003385060 
Protein GI284035130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTACG TTATTACCGG CTCGTTAGGG CATACCGGAA AGCCCATTAC TGAAGGCCTC 
ATTAAAGCGG GTCATCAGGT TACCGTTATT ACCAGTAAAC CCGAAACCGC AGAAGCCATC
GAGGCTCTGG GTGCCAGGGC TGCTGTAGGC AGTGTTGAAG ACGCGGCTTT CGTGACCGAA
GCCTTTGCGG GAGCGCAGGC CGTTTATCTG CTCGTTCCGG GCAAATGGGG CGTTACGGGT
TGGCGAAACT TCCAGAATCA AATTATCGAC AATTACATTG CGGCCATTGA GGCCAACGAC
ATTCGGTTTG CCGTACTGCT GAGCAGTATA GGGGCCGATT TAGGCGATGG TGCCGGGCCG
GTCGACGGCT TGTATGATGC CGAACAGAAG TTGGCCAAAG TGCCCGGCCT GAACAGCAAG
TTTCTGCGTC CGTCGTATTT CATGTATAAT CTCTTCGGCA TGTTGGGCAT GGTAAAAGGC
ATGGGGATAA TGGGAAGCAA CTTTGGCGGA GATACCCTTG TGCTGACCCA TACCAATGAT
ATTGCCGACG TTGCACTGAC CGAACTGCTC AACCTGGATT TTACCGGCCA GCAGGTGCGC
TATATTGCCA GCGATGAACG CACGGGTGCC GAAATTGCCC AGGTGCTCGG GCAGGCAATC
GGTAAACCCG AAATTCCCTG GGTTGTCTTC TCCGACGAAC AGACTAAGCA GGGGCTAGTA
CAGGCCGGAC TAAATGACGA GATGGCATCG GCATATACCA CTATGGGAAA GTCGCTCCGC
GAGGGGAAAA TGCAGGCCGA CTTCTTTGCC AACCGTCCCG CTGTTTATGG TAAAGTAAAA
CTCGAAGCGT TTGCTGAAAA TGAGTTCGCC CCGGCGTTCA ACGCGTAA
 
Protein sequence
MNYVITGSLG HTGKPITEGL IKAGHQVTVI TSKPETAEAI EALGARAAVG SVEDAAFVTE 
AFAGAQAVYL LVPGKWGVTG WRNFQNQIID NYIAAIEAND IRFAVLLSSI GADLGDGAGP
VDGLYDAEQK LAKVPGLNSK FLRPSYFMYN LFGMLGMVKG MGIMGSNFGG DTLVLTHTND
IADVALTELL NLDFTGQQVR YIASDERTGA EIAQVLGQAI GKPEIPWVVF SDEQTKQGLV
QAGLNDEMAS AYTTMGKSLR EGKMQADFFA NRPAVYGKVK LEAFAENEFA PAFNA