Gene Slin_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0186 
Symbol 
ID8723914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp250248 
End bp251096 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385050 
Protein GI284035120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTTAT CCGGCAATGG TCATCTGGGC TGGTTGTTGC TAAAAAAGAC CGTCAAACAA 
ATCCGTTGGC TAGTATCAAC GCTGATACGG TTTCAGAGCA AACGGCCTCG CCTTTACTTG
TCTGCTCAAG GCAGGGGGAC TGAGTCAGGC TGGTTGGCCC GACCCAAGGG CTTGTTCAGC
GCAGACAAAT TGCCGGTTGC CTTCCTGGCA ATGGTCATGG GCTTTCTTTC CGTTAGTGCC
TTTGGGCAAA CCATCTCTGG AACCGTCTAT TTTGACGGGA ATAATGATGG TATCCGAAAC
ACGAAAGAAA TAGGCTTTGG GGGGGTAGTC GTAAAAGCGT ATGATCCATC CAATACACTG
GTTGCCAGTA CGACCAGTAA CCTCTCTTCG GGTACAGGTG CTTACACCCT GTCAGGCCTA
ACCAATGGCA CCGTGTACCG CGTGGAGTTT ACCCTACCCT CCGGCTACAA CTATGGAGCC
AAGGGTTCAG CATCGAATAC CTCCGTGCAG TTTGTCAAAT CATTTTCGGG ATCAATCGCC
GATTTCGGCG TATATACCAC TGGGGTTTGT GATCCTGATG GCAAGATCAG GGTAGTGACT
GGCTGTAATC AGGTAGGAGA CACGCCTGAG ACTAGCGTTG CCTCGTGGTA TTACCTGGAA
GACCGTGTAC AAACCATTCC ATCGGCGGCA ACAACCCGCA CCGATATGGA TGTTCAAGGC
CAAAGTGATT TAGGTATCCC CTTGGGCATG GGCAGCCGAA AGATAAACTC CTGTTTTGGT
CGACCGTATG AGCACCGTTT ATTGACCGAT TTCCCAAATC TACTGACGGC GCTTCGGCGA
TCTATGTAG
 
Protein sequence
MGLSGNGHLG WLLLKKTVKQ IRWLVSTLIR FQSKRPRLYL SAQGRGTESG WLARPKGLFS 
ADKLPVAFLA MVMGFLSVSA FGQTISGTVY FDGNNDGIRN TKEIGFGGVV VKAYDPSNTL
VASTTSNLSS GTGAYTLSGL TNGTVYRVEF TLPSGYNYGA KGSASNTSVQ FVKSFSGSIA
DFGVYTTGVC DPDGKIRVVT GCNQVGDTPE TSVASWYYLE DRVQTIPSAA TTRTDMDVQG
QSDLGIPLGM GSRKINSCFG RPYEHRLLTD FPNLLTALRR SM