Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0160 |
Symbol | |
ID | 8723888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 200814 |
End bp | 201689 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | UbiA prenyltransferase |
Protein accession | YP_003385025 |
Protein GI | 284035095 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000799272 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000000000598028 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTAAAG CACTTCTCTC CCTAACCCGG CCGGCCAACC TGGTTACGTC TGTTGCCGAT GTACTGGCCG GTATGGCTAT TGCGGGTTAT TTTGGCGTTT ATGACCCGGC CCCGGCTCCG GTGGGATGGC TTTGTCTGGC AACAGTCGGA TTGTACGGTG GGGGCGTTGT CTTCAACGAT GTGTTCGATG CCGAGCTGGA TGCTGTTGAG CGGCCCGAGC GGCCCATTCC CAGCGGAGTC GTCCCTAAAT CAACGGCTGC CTTACTCGGA ACGGTGTTGT TTATGATGGG TATCGCTGCA TCGTTTGCCG TTAACCAAAC GGCGGGTCTA CTGGCAATTG GTATTACCGT AGCCTCGCTG GTTTATGATA AGTTCGGGAA ACATCATAAC CTGCTTGGTC CTGTAAACAT GGGGCTTTGT CGGGGCCTGA ATCTGTTGCT TGGTATCAGC ATCATTCCCG ATCAGGTTAT GCCCTGGGCG TGGGTTGGTC TGGTGCCCAT TGCCTACATT GCGGCCATCA CTATGATTAG CCGGGGCGAA GTTCACGGTG GAAGTCCAAC GACACTCCGG TTTGCCGGGA TTCTCTATGC GCTGGTGATC GGTTGCCTGG CCGCTCTGGC GCAACGGCAG CAACAGTTGG GTACGGCTCT GCCGTTTCTG CTTTTATTTG GCTACTATAT TTTCCCGCCC CTCTGGCGAG CCGTGAAAGA ACCCGTTGGC CGGAATATTG GCCTGGCCGT TCGGGCGGGG GTGCTATCGC TCATTGTCAT GAACGCGGCC TGGGTGGCGG CTTTCGCGTC GTTCCCGCTG GCTATGCTGG TCTTTTGCCT GCTGCCGCTG TCAAGATTGC TGGCAAAAGT TTTTGCTGTG ACGTAG
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Protein sequence | MLKALLSLTR PANLVTSVAD VLAGMAIAGY FGVYDPAPAP VGWLCLATVG LYGGGVVFND VFDAELDAVE RPERPIPSGV VPKSTAALLG TVLFMMGIAA SFAVNQTAGL LAIGITVASL VYDKFGKHHN LLGPVNMGLC RGLNLLLGIS IIPDQVMPWA WVGLVPIAYI AAITMISRGE VHGGSPTTLR FAGILYALVI GCLAALAQRQ QQLGTALPFL LLFGYYIFPP LWRAVKEPVG RNIGLAVRAG VLSLIVMNAA WVAAFASFPL AMLVFCLLPL SRLLAKVFAV T
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