Gene Slin_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0160 
Symbol 
ID8723888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp200814 
End bp201689 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content56% 
IMG OID 
ProductUbiA prenyltransferase 
Protein accessionYP_003385025 
Protein GI284035095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000799272 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000000598028 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTAAAG CACTTCTCTC CCTAACCCGG CCGGCCAACC TGGTTACGTC TGTTGCCGAT 
GTACTGGCCG GTATGGCTAT TGCGGGTTAT TTTGGCGTTT ATGACCCGGC CCCGGCTCCG
GTGGGATGGC TTTGTCTGGC AACAGTCGGA TTGTACGGTG GGGGCGTTGT CTTCAACGAT
GTGTTCGATG CCGAGCTGGA TGCTGTTGAG CGGCCCGAGC GGCCCATTCC CAGCGGAGTC
GTCCCTAAAT CAACGGCTGC CTTACTCGGA ACGGTGTTGT TTATGATGGG TATCGCTGCA
TCGTTTGCCG TTAACCAAAC GGCGGGTCTA CTGGCAATTG GTATTACCGT AGCCTCGCTG
GTTTATGATA AGTTCGGGAA ACATCATAAC CTGCTTGGTC CTGTAAACAT GGGGCTTTGT
CGGGGCCTGA ATCTGTTGCT TGGTATCAGC ATCATTCCCG ATCAGGTTAT GCCCTGGGCG
TGGGTTGGTC TGGTGCCCAT TGCCTACATT GCGGCCATCA CTATGATTAG CCGGGGCGAA
GTTCACGGTG GAAGTCCAAC GACACTCCGG TTTGCCGGGA TTCTCTATGC GCTGGTGATC
GGTTGCCTGG CCGCTCTGGC GCAACGGCAG CAACAGTTGG GTACGGCTCT GCCGTTTCTG
CTTTTATTTG GCTACTATAT TTTCCCGCCC CTCTGGCGAG CCGTGAAAGA ACCCGTTGGC
CGGAATATTG GCCTGGCCGT TCGGGCGGGG GTGCTATCGC TCATTGTCAT GAACGCGGCC
TGGGTGGCGG CTTTCGCGTC GTTCCCGCTG GCTATGCTGG TCTTTTGCCT GCTGCCGCTG
TCAAGATTGC TGGCAAAAGT TTTTGCTGTG ACGTAG
 
Protein sequence
MLKALLSLTR PANLVTSVAD VLAGMAIAGY FGVYDPAPAP VGWLCLATVG LYGGGVVFND 
VFDAELDAVE RPERPIPSGV VPKSTAALLG TVLFMMGIAA SFAVNQTAGL LAIGITVASL
VYDKFGKHHN LLGPVNMGLC RGLNLLLGIS IIPDQVMPWA WVGLVPIAYI AAITMISRGE
VHGGSPTTLR FAGILYALVI GCLAALAQRQ QQLGTALPFL LLFGYYIFPP LWRAVKEPVG
RNIGLAVRAG VLSLIVMNAA WVAAFASFPL AMLVFCLLPL SRLLAKVFAV T