Gene Slin_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0153 
Symbol 
ID8723881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp192925 
End bp193407 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content50% 
IMG OID 
Productresponse regulator receiver protein 
Protein accessionYP_003385018 
Protein GI284035088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.364118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000231464 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTACGAAA CGTACCTGTC ACGAGCCCCT ACGGTATCCC AGCCTGAAGG CCAGGAGGTC 
AACAGGCAGG TTAAAACGCC TAGACCAACA ATTCTTGTTA TCGAGGATAA TGCGGATGAG
TGGTTCCTGA TTCGATGGGC ATTGCTTCAG CACTTTCCCA TCTCGCAGGT GATCTGGATT
TCTGAACCTA CCCGGGTGAT GCATTACCTA AACAAATGCG TTCAGCGTGA AATCGACTTA
CCCCGCTTAA TTTTGGTGGA CTTATACCTG CCTACTGCAC AATCGGGCCT CAATGTTCTG
CAAAAGATCA AGCGGCACGC GGCCTACAGA ACTATCCCTA CGATTATCAT TAGCAGTTCC
AATAACCCCG ACGATATTGA GAGTGCGCTT ACTCATTCCA GCAACTCGTA CATTATCAAA
CCCTTTACGT ACGACGAATG GCGGGAGCGG TTTTCCATGC TTCGGCCCTA CTGGACCGAG
TGA
 
Protein sequence
MYETYLSRAP TVSQPEGQEV NRQVKTPRPT ILVIEDNADE WFLIRWALLQ HFPISQVIWI 
SEPTRVMHYL NKCVQREIDL PRLILVDLYL PTAQSGLNVL QKIKRHAAYR TIPTIIISSS
NNPDDIESAL THSSNSYIIK PFTYDEWRER FSMLRPYWTE