| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0143 |
|---|
| Symbol | |
|---|
| ID | 8723871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 179339 |
|---|
| End bp | 180526 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003385012 |
|---|
| Protein GI | 284035082 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.184746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.13553 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGAA ATAATCAGAT TGATTTTTTT AGAGGTTTTT TGTTGATATT AATAACGATT
AACCACTTTG TATCGGAAAC TAATATTATT ATTCGTCTTA CCAGAGAATC AATTGGTTGG
GTAGAGGGTG CATCCGGGTT TGTGTATTTG TCGGGGTTTA CGGTTGGGCT AGTCTATACA
AACAAGTTTA TAAAAAAAGG AGCAAACGAA ATAGAACGCG CTGCACTGAA ACGATCTTGG
CTTATCTACA AATTTCACAT CGGTGTCTTT TTTGTTAGTT TACTGGCTGT ATTTACACTA
ACAACCGTTA GAAGCCACTG GGAGCCTTTT TATGGGACAA TGCTGGCAAA CCCCGTAGCC
GCATCCATCT TGGCACTGGT TTTCCTCTAC CAGCCAGCTA ATATGGATAT TTTGCCCATG
TACGCCGTTT TTCTACTTTT TGTGCCCTGG ATTATCACCC ATTTGCAGAA TCATTCTAAA
GGGTATTTCG CAGTCTTATT AATATCGTCA ATTGTCTATG TAGTCGGAAC GTTTGAACTT
CTCTTACTAA ATTATTACCG GTATAGCTGG AGTAGATGGG TTGATCCAGG CTATTTTAAC
ATGCTTTCCT GGCAGCTTAT ATTTGTTGTA GGAATTATTT TGGGTAACCT GTCGTACAAG
AAAAAACTGG GTGATTTGCT TGATAAACCA TACATCGTAT GGGGTGCGCT AGTTGTTGCT
GTTTCCCTTT TTCTAATCAA AAATCTCCTG GGGCTCCACC TGATCGAAAT TACGGGTTAC
GACATAAACT TCTGGAACGC AAAAAAATAT CTCCGTCCAC TGCGGTTAAT TAACGTTGCC
GCTGTCTTTA TTCTGATTCG CTGGTTGATG GTAAAAAACC CTACCTGGTT TCAGTATAAA
CCCGTCGCTT ATCTTGGAAA AAATTCGCTG GAGGTTTTCG CCTTTCATAT TATCCTGGTG
TTACTTTTTT CGCCGTTCAA CGCTTATCTT ACCAGTCTCA GCGCGTACCG TGTGTTTGGC
GGTTATTACT TTTATCCGCT GGAAACATTA TTGACCTGCA CCGTAGTGGC TTCGCTTTAT
CTGGCACCTG CGTTATGGAA TATCACGACA CGCTATTATC AGGAAGTAAA AATAGCTGCC
TCTAAACAAA TGAATAAACT AATCCAGCCT AAGCATACGG AAGTGTAA
|
|---|
| Protein sequence | MERNNQIDFF RGFLLILITI NHFVSETNII IRLTRESIGW VEGASGFVYL SGFTVGLVYT
NKFIKKGANE IERAALKRSW LIYKFHIGVF FVSLLAVFTL TTVRSHWEPF YGTMLANPVA
ASILALVFLY QPANMDILPM YAVFLLFVPW IITHLQNHSK GYFAVLLISS IVYVVGTFEL
LLLNYYRYSW SRWVDPGYFN MLSWQLIFVV GIILGNLSYK KKLGDLLDKP YIVWGALVVA
VSLFLIKNLL GLHLIEITGY DINFWNAKKY LRPLRLINVA AVFILIRWLM VKNPTWFQYK
PVAYLGKNSL EVFAFHIILV LLFSPFNAYL TSLSAYRVFG GYYFYPLETL LTCTVVASLY
LAPALWNITT RYYQEVKIAA SKQMNKLIQP KHTEV
|
|---|
| |