Gene Slin_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0069 
Symbol 
ID8723797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp87249 
End bp88082 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content50% 
IMG OID 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_003384941 
Protein GI284035011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAA TCAGTACAAT ACTATCGTTC TGCTTTTTGC TGTTATTTTT CGCCACCACC 
AGCCACAGCC AATCTGTTAA CTGGAAAAGA GTGAAGGTGC TGGTTTACAC CAAAAACGGC
AAAGGCTATG TGCACGACAA CATTCCGAAT GCGGTGCAGT GCATCCAGAA ACTCGGGCAG
CAAAATGGCT TCTCCGTTGA TGTTTCTGAA GACCCCGTCG TTTTTACCGA AGATAACCTG
AAAAAGTACA CCCTGCTGCT GTTCCCCAGC ACCAACAACG ACGTGTTCGA TACCGACGAC
CAGCGACTGG CGTTCCGGCG GTACATCGAA GCAGGGGGCG GTTTTGTGGG TATTCATTCC
GTGATGGGTA CCGAACGTAA CTGGACCTGG TTCAAGCGCA TGATTGGCGG CAGCTTCGCC
TGGCACCCAA AATTTCAGAA GTTCACTGTG GAAGTGATTG ATACGAAAAA TTCATCTATG
CAGGGCCTGC CGAAAAAGTG GCAACGGGAA GATGAATTTT ATTTTACCAA AGAGATGTCG
CCGGGCCCAA CGGTCATTAT GGCTAACGAC TTGACTACGC TGAACAACGA CGAACCCGAG
AAAGTAAAAA TGTTCGGGGG CACCTACACG CAACTGTACC CGTCGGCCTG GTACTACAAT
TTCGACGGTG GCTATACCTG GTGTACTACC CTTGGCCATG CCAAAACCGA TTACCTGAAC
GACGAAACTT TCATCAAACA CATTTTCCAG GGCATCCGCT ATGTGGCCGG TCAGGTAACC
AAACTCGACT ACAGCAAAGC CTACGCCGAT TCCAGAGATA CGCCGATTCG GTAA
 
Protein sequence
MNRISTILSF CFLLLFFATT SHSQSVNWKR VKVLVYTKNG KGYVHDNIPN AVQCIQKLGQ 
QNGFSVDVSE DPVVFTEDNL KKYTLLLFPS TNNDVFDTDD QRLAFRRYIE AGGGFVGIHS
VMGTERNWTW FKRMIGGSFA WHPKFQKFTV EVIDTKNSSM QGLPKKWQRE DEFYFTKEMS
PGPTVIMAND LTTLNNDEPE KVKMFGGTYT QLYPSAWYYN FDGGYTWCTT LGHAKTDYLN
DETFIKHIFQ GIRYVAGQVT KLDYSKAYAD SRDTPIR