Gene Slin_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0062 
Symbol 
ID8723790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp77707 
End bp79428 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content56% 
IMG OID 
Productpotassium-transporting ATPase, A subunit 
Protein accessionYP_003384934 
Protein GI284035004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACGG AATTAATCGG CGTTATCGTC ATGTATGGGC TGACCGTCCT GCTGGCTATA 
CCGCTGGGCA AGTACATTGC CAACGTCTTT AGACCAGAAT CGGCCAATGG CCCGCTGGAA
CGGTTCATCT ATCGCGTTGG CGGTATCGAC CCCACCCGCG AGATGAGCTG GAAAGAAAAT
CTCACCGCTC TGCTCACTAT CAACGCGGTC TGGCTGGCGT TCTCCTTTAC CCTGCTGCTG
TTGCAGGGCA TGCTACCGCT TAACCCCGAC GGCAACCCGT CCATGACACC CGATCTGGCG
TTCAATACCG CCATCAGTTT CATGGTCAAC TGCGATTTGC AACACTATTC GGGCGAGTCG
GGCCTGACGT ATCTGACGCA GTTATTCGTC ATCAACTTCC TGATGTTCGT TTCGGCGGCC
ACGGGTATTG CGTCGCTGCT GCTGATCGTC CGGTCGTTTC TACCAAAGGT TGTCGATACG
GTGGGTAATT TCTATGTGTT CTTCGTGAAG GCGATTACCC GGATTCTATT GCCCCTTTCG
TTCGTCGTAT CTCTGATACT GGCCTTTAAC GGCACTCCGG CCAGTTTCGA TGGGAAAGAC
AGTATCGTAA CGATGCAGGG CGATACGGTC GGGGTTTCGC GCGGACCGGC GGCTGGTATG
ATTGCCATCA AACACATCGG TACCAACGGG GGCGGCTGGT TCGGTGTCAA CTCGGCGCAC
CCGCTGGAGA ACCCTAACTA TCTTACCAAT ATGGTCGAGA TGGTGGCGCA GGTGCTGATT
CCTATAGCCA TGCTGTTTGC GCTGGGCTTT CTGATCAACC GTCGGCGGTT TACGTGGGTG
GTGTATGGCG TTATGACCCT CGGTATGCTC TGTCTGCTCA TCCCGACGCT GGTTACAGAA
GTCCACGGCA ACCCGGCCAT TGCGCAACTG GGCGTGAGCC AGCCAACCGG CGCGATGGAA
GGCAAAGAGG TTCGGTTTGG GCCACTGGCG TCGGCTTACT GGAGCATTGT CACGACTATT
ATTTCGACGG GTTCGGTCAA CTCCATGCAC GATTCGTCGA TGGCGCTCTC GGGTACGATG
GAACTGTTGG GCATGATGAC CAACGCCTTC TACGGCGGTT GCGGTGTTGG CTTCCTGAAC
TACTATTATT ACCTGATTAT CGCGGTCTTC ATATCGGGCC TTATGGTGGG CCGGACGCCG
GAGTTATTCG GGCGAAAGGT GGAAGCGCGG GAGATCAAGA TTGCTTCGAT TGTGGCTTTG
CTGAGTACGT TGCTGGTCAA GGGCGGTACG GCGCTGGCGG TTTGGTTCTT CGTAAAATAC
CCGGATGCTG CCGCCGGGGT CGCGTCCGAC TGGGCTGTGA AACCCTCGGC CTGGCTTAAC
AACCCCGGCA ATCATGGTTT CTCGGAGCTA TTGTACGAAT TCACGTCGGC CAACGCCAAC
AACGGATCGG GCTTTGAAGG ATTGGGCGAC AACAATTTTT TCTGGAACTA CGCTACAGGT
ATTGTCCTGA TTCTGGGGCG GTTCATCCCG ATCATCGGTC CGGTGGCCAT TGCGGGTTTG
CTGGCCCAGA AGAAGTACGT GCCGGAATCG GCGGGGACAC TGCCCACGGA CACGGGCACC
TTCGGACTAA TGACCTTCGC CGTGATCTTA ATCATCACAG CCCTGTCGTT TTTCCCCGCG
CTGGCCCTCG GTCCACTGGC GGAGTACTTC AGTCTGAAGT AA
 
Protein sequence
MSTELIGVIV MYGLTVLLAI PLGKYIANVF RPESANGPLE RFIYRVGGID PTREMSWKEN 
LTALLTINAV WLAFSFTLLL LQGMLPLNPD GNPSMTPDLA FNTAISFMVN CDLQHYSGES
GLTYLTQLFV INFLMFVSAA TGIASLLLIV RSFLPKVVDT VGNFYVFFVK AITRILLPLS
FVVSLILAFN GTPASFDGKD SIVTMQGDTV GVSRGPAAGM IAIKHIGTNG GGWFGVNSAH
PLENPNYLTN MVEMVAQVLI PIAMLFALGF LINRRRFTWV VYGVMTLGML CLLIPTLVTE
VHGNPAIAQL GVSQPTGAME GKEVRFGPLA SAYWSIVTTI ISTGSVNSMH DSSMALSGTM
ELLGMMTNAF YGGCGVGFLN YYYYLIIAVF ISGLMVGRTP ELFGRKVEAR EIKIASIVAL
LSTLLVKGGT ALAVWFFVKY PDAAAGVASD WAVKPSAWLN NPGNHGFSEL LYEFTSANAN
NGSGFEGLGD NNFFWNYATG IVLILGRFIP IIGPVAIAGL LAQKKYVPES AGTLPTDTGT
FGLMTFAVIL IITALSFFPA LALGPLAEYF SLK