Gene Slin_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0031 
Symbol 
ID8723759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp36174 
End bp37211 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384904 
Protein GI284034974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.618499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAGT TTATCAGTTC TCTACTTCTT CTGACTGTTC TGGCGGCCTG CATCGATCAG 
GTTCAGCTGC CTATCCGAAC GGAGGCCCCA CGTTTGGTTG TTGAAGGTCA GATTACCAAC
GAAGCCCCTC CCTATACCGT TCGTCTGGCG TATACCGGCA AGTACGGCGG TGAGGACGGG
CAAAATGTCA ACGATCAATA TGTAAGCGGT GCTCAGGTTA CTCTTGGTGA TGATCAGGGT
CGGTCCGCGA GATTTGCCCC AACAGGGCCG GGAGTTTACC AGATGACCGA TGCCCGCTTT
CGTGGGCAGG TTGGCCGAGC CTACAGCCTG ACGGTGACAC TGACCGACGG CAGACAGTAC
ATAAGTAAAG CGGAACGGAT GCCCGCTGTG CCGCAAATCG ACAGTGTGTC GTCCAGACTG
GTTAAAACCG GTAATCTCTC CATTCCCTAC GCGTTTGCCT ACGGAGCCAA TACGAGTGAC
CCCGCTGGTG AGCAAAATTA TTACCGCTGG ACGGCCTATG GCTACACGAA CCGGCTGTCG
ATTGGCGTAC CCTGTAGCCT GGGTAGTCCT AACCTGTGCA ACAACCGCTG CTGGAAGATG
GTATCGACCA ATGTCGTTAA CGTATTCAGC GATGAGGCTA TCAACGGCAA TCCGCTGCGA
AATCGGGTTG TCTTACAGAT ACCGATTTAT ACGGTAGCTC CCCAACTGGT TGAAGTGCAG
CAGTATGCCA TTACGCAGGC GAACTATCAG TTCTGGAAAC TTTATCAGCA GCAGAATGCC
CGCACCGGGA GCATCTTCGA CCCCTTACCG GCGCCTGTTA CGGGCAACCT GGTAAACACC
GCCGACCCAA CCGATCTGGC GAGAGGGTAC TTTGCCGTGA CATCGGTTAC TCGCCGTCGG
TTTCGGCAGC AGGAGTACCC GGCGGTTACT TTTTACCCGG CTTTAACGAG TTTTATCAGC
AGTCAGATAA TTCCCCCCGG CGATTGCCGG AACACCTACG GTTGGGATTC TGCCCTTGTG
GAGCCCGATG GCTGGTGA
 
Protein sequence
MRQFISSLLL LTVLAACIDQ VQLPIRTEAP RLVVEGQITN EAPPYTVRLA YTGKYGGEDG 
QNVNDQYVSG AQVTLGDDQG RSARFAPTGP GVYQMTDARF RGQVGRAYSL TVTLTDGRQY
ISKAERMPAV PQIDSVSSRL VKTGNLSIPY AFAYGANTSD PAGEQNYYRW TAYGYTNRLS
IGVPCSLGSP NLCNNRCWKM VSTNVVNVFS DEAINGNPLR NRVVLQIPIY TVAPQLVEVQ
QYAITQANYQ FWKLYQQQNA RTGSIFDPLP APVTGNLVNT ADPTDLARGY FAVTSVTRRR
FRQQEYPAVT FYPALTSFIS SQIIPPGDCR NTYGWDSALV EPDGW