| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0022 |
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| Symbol | |
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| ID | 8723750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 22250 |
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| End bp | 23938 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003384895 |
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| Protein GI | 284034965 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.201745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTATA CTATGAAAAA GATATTTCTC AGCTCGCTGA CCATCCTCAG CCTGCTTTTC
CTGAATAGTT GTACGAACTT GGTTGAACAG GTTCTCGACG AGTCGTCGGT GACCGGCCAG
ACCGACAAGC AAATTGCCGA TGGTAACATC GCTCCAGTAT ACGCCCGTCT GACGGACATT
TTTACGCACA CTACCTATTT TGCCATCCAG GAAATTTCTA CCGACGAAGC TATTTTACCC
TATCGGGGTG GTACCGACTG GGGTGACAAC GGGATTTACA TTGCTATGCA CCAGCATACG
CATACAAGTA CTGACCCTAA CCTACGCAAT ACCTGGTTGT TATTGACGCA GGAAGTATCA
AGAGCCGTTT CGGCCATGAG TGCCCTGCCT ACCGTGAATG ACCCCAATGC CAAAACCTAC
CTGGCCGAGG CACGGGGTAT GCGGGCTTAC TACAATATGA TGCTGCTGGA TTTATTTGGT
GTGGTCTTCG TAAAAGAAGA CCCGCAGAGT ATTTCTCAGG TGTTGCGGGG CGAACCCGCC
TACGAGTATG TGAAAAACGA GTTTCTGGCC GTTGAACCAA GCCTCCTGAC AACGGTTGGG
CCAGGACGCC TTACCAAAGG AGCCGTGTGG GGCCTGCTGG CGCGTCTGTA TCTGAATGCC
GCCGTGTATC GCGACCGGTA CGCTGCCAGC TTTACCTTCA AGCCGGAAGA TATGGATAAG
GTGATTGAGT ATACGGATAA GATCATTACC TCCGGCCAGT ACCAGTTATC GCCTGATTAT
TTCTCAATTT TCAACTCCGA CAACCACGAT AACAAAGAGT TGATCTTTGC CGTCGACCAG
CGCGCGGAAC TGAATGGGCA CAACCGCCTG GCGTATTTCT CGCTATCTGG CGACCAGTTT
CCGCTGCCTG CTTTCCCCGC TGCCAATGGT ACCGATGGCC CGGCTATCAC GCCTGATTTT
TACCGCAGCT GGACATCAGC TTACGCACCA AGTGATCCGG CCGGTGTTGA TCCCCGCTTC
TCCAAACAGA ACTGGACGAT TCCCGCCGAT TCGTGCATCA GTGATGCCAA CTTCAATTTT
AACCGGGGTA TTTTACGGGG CCAGCAGTAT GGCCTGCTTC GGGTCAACGG TGCCTTTCTT
CGTTGCGGCA ACAATTACAA AATTGGTAAG CTCTTCAACG TAACCCGTAA CCGCCCCACG
CTACCTGTTG ACTTTACCGA GCAGGTTGAC TTCTCGGTTG CCGGCAGCAA TTACAGCACT
GGATACCGGG TGTTAAAGTA TGAATTCAGT AAAAAATCGC AGTCGGGTCG TAACCTGGGC
GATGCCGATA TTTCCATTGT TCGCTTAGCC GATGTGTATC TGATGCGGGC TGAAGCCAAA
CTCCGTAAAA GTAATGATGC GGCCAGTGCA CTGGCTGATG TCAATCTGGT GCGGGCGGCT
CGTACGGCCG CTAAGCCAGC GCCAGCCCTG ACAGCTATGA ACCTCGATCT GCTGCTGCGC
GAACGGGGCT TCGAGTTATA CTGGGAAATG GTACGCCGTA CCGACCTGAT CCGTTTTGGT
AAGTATGAGG GTACATGGAC TGAAAAGACC AACACCGACA AGTTTAAGCG GGTGTTCCCC
ATTCCGCAAA CGGCTATCGA TGGAGCGTCG AACCTGCCAG GGTACCTGAA GCAGAACGAG
AGCTACTAA
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| Protein sequence | MYYTMKKIFL SSLTILSLLF LNSCTNLVEQ VLDESSVTGQ TDKQIADGNI APVYARLTDI
FTHTTYFAIQ EISTDEAILP YRGGTDWGDN GIYIAMHQHT HTSTDPNLRN TWLLLTQEVS
RAVSAMSALP TVNDPNAKTY LAEARGMRAY YNMMLLDLFG VVFVKEDPQS ISQVLRGEPA
YEYVKNEFLA VEPSLLTTVG PGRLTKGAVW GLLARLYLNA AVYRDRYAAS FTFKPEDMDK
VIEYTDKIIT SGQYQLSPDY FSIFNSDNHD NKELIFAVDQ RAELNGHNRL AYFSLSGDQF
PLPAFPAANG TDGPAITPDF YRSWTSAYAP SDPAGVDPRF SKQNWTIPAD SCISDANFNF
NRGILRGQQY GLLRVNGAFL RCGNNYKIGK LFNVTRNRPT LPVDFTEQVD FSVAGSNYST
GYRVLKYEFS KKSQSGRNLG DADISIVRLA DVYLMRAEAK LRKSNDAASA LADVNLVRAA
RTAAKPAPAL TAMNLDLLLR ERGFELYWEM VRRTDLIRFG KYEGTWTEKT NTDKFKRVFP
IPQTAIDGAS NLPGYLKQNE SY
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