Gene Slin_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0014 
Symbol 
ID8723742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp14015 
End bp15139 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content52% 
IMG OID 
Productamidohydrolase 2 
Protein accessionYP_003384887 
Protein GI284034957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00386007 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTT TTTACCTGTC TGCCTTTTTA CTAACAGGCC TGCTTGCCTG TGGTCAGTCT 
AAACCAAGTC AACCCGACAT GCCGTTGGGT TTTGAGGAGT ATGATCCTGT TTCGACGCTG
AAAGTACCGG AGCATAAGCT GACGCGTTCG AAGTTTCCAT TCATCGATGT TCATAACCAC
CAGTGGGATA TGGACAAGGC GAATCTCAAA CCGCTTCTGG CCCAGATGGA CAGCCTGAAT
ATGGGCATTA TGATCAACCT CAGCGGCCGG GGTTGGGGCA GTGTAGCGCA GGGAACGCAG
TTTTTCGACA ATGCGATGGC GAATGCGGCC AAAGCTTCGC CCAAACGACT GGCGCTGTTT
ACTAATCTCA ACTTCGACGA GATTGGCCGG AAAGGCTGGA CGGAAGATGC CGTTAAACTA
CTCGAAGAAG ACGTAAAAAA AGGCGCCCGT GGCCTCAAGA TCTTCAAGAA TCTGGGTTTA
AATAACAAAG ATGTATCCGG TCAGCGCGTT CGGGTAGACG ATCCGCGCCT TGACCCCATC
TGGGCCAAAT GTGGTGAACT GGGCATTCCT GTGCTGATTC ATACCGCCGA CCCCAAGTCG
TTCTGGGACC CGATGGACCG TTATAATGAG CGCTGGCTCG AACTGAAACT ACATGGCGGG
CGTAAACGCT CGGCCAACGA CCCCATCCCC TGGGATAAAC TTATTGCCGA GCAGCATAAC
GTATTCCGGA AACACCCGAA AACAACATTC ATTGCCGCTC ACATGGGATG GTACCCCAAC
GACCTCAACA AACTCGATAG TCTGATGACG GTCTTCCCGA ACATGAATGT CGAAATTGGG
GCCGTCATCG CTGAACTGGG CCGCCAGCCA CGCGCCAGCC GGAAGTTCTT TGAGAAGTAT
CAGGACCGGA TTCTGTTCGG AAAAGACAGC TGGGTGCCAT CCGAATACGC TACCTATTTC
CGCGTGCTCG AAACAGAGGA TGAATACTTC CCCTACCACA AAAAGTACCA CGCTTTCTGG
CGCATGTACG GTATGGGATT ACCAGACGAG ATTCTGAAAA AAGTCTATTA CAAAAACGCC
CTTCGGATCG TGCCCGGCCT GGACAAGAGC CAGTTCCCCA AGTGA
 
Protein sequence
MRIFYLSAFL LTGLLACGQS KPSQPDMPLG FEEYDPVSTL KVPEHKLTRS KFPFIDVHNH 
QWDMDKANLK PLLAQMDSLN MGIMINLSGR GWGSVAQGTQ FFDNAMANAA KASPKRLALF
TNLNFDEIGR KGWTEDAVKL LEEDVKKGAR GLKIFKNLGL NNKDVSGQRV RVDDPRLDPI
WAKCGELGIP VLIHTADPKS FWDPMDRYNE RWLELKLHGG RKRSANDPIP WDKLIAEQHN
VFRKHPKTTF IAAHMGWYPN DLNKLDSLMT VFPNMNVEIG AVIAELGRQP RASRKFFEKY
QDRILFGKDS WVPSEYATYF RVLETEDEYF PYHKKYHAFW RMYGMGLPDE ILKKVYYKNA
LRIVPGLDKS QFPK