Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0014 |
Symbol | |
ID | 8723742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 14015 |
End bp | 15139 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | amidohydrolase 2 |
Protein accession | YP_003384887 |
Protein GI | 284034957 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00386007 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAATTT TTTACCTGTC TGCCTTTTTA CTAACAGGCC TGCTTGCCTG TGGTCAGTCT AAACCAAGTC AACCCGACAT GCCGTTGGGT TTTGAGGAGT ATGATCCTGT TTCGACGCTG AAAGTACCGG AGCATAAGCT GACGCGTTCG AAGTTTCCAT TCATCGATGT TCATAACCAC CAGTGGGATA TGGACAAGGC GAATCTCAAA CCGCTTCTGG CCCAGATGGA CAGCCTGAAT ATGGGCATTA TGATCAACCT CAGCGGCCGG GGTTGGGGCA GTGTAGCGCA GGGAACGCAG TTTTTCGACA ATGCGATGGC GAATGCGGCC AAAGCTTCGC CCAAACGACT GGCGCTGTTT ACTAATCTCA ACTTCGACGA GATTGGCCGG AAAGGCTGGA CGGAAGATGC CGTTAAACTA CTCGAAGAAG ACGTAAAAAA AGGCGCCCGT GGCCTCAAGA TCTTCAAGAA TCTGGGTTTA AATAACAAAG ATGTATCCGG TCAGCGCGTT CGGGTAGACG ATCCGCGCCT TGACCCCATC TGGGCCAAAT GTGGTGAACT GGGCATTCCT GTGCTGATTC ATACCGCCGA CCCCAAGTCG TTCTGGGACC CGATGGACCG TTATAATGAG CGCTGGCTCG AACTGAAACT ACATGGCGGG CGTAAACGCT CGGCCAACGA CCCCATCCCC TGGGATAAAC TTATTGCCGA GCAGCATAAC GTATTCCGGA AACACCCGAA AACAACATTC ATTGCCGCTC ACATGGGATG GTACCCCAAC GACCTCAACA AACTCGATAG TCTGATGACG GTCTTCCCGA ACATGAATGT CGAAATTGGG GCCGTCATCG CTGAACTGGG CCGCCAGCCA CGCGCCAGCC GGAAGTTCTT TGAGAAGTAT CAGGACCGGA TTCTGTTCGG AAAAGACAGC TGGGTGCCAT CCGAATACGC TACCTATTTC CGCGTGCTCG AAACAGAGGA TGAATACTTC CCCTACCACA AAAAGTACCA CGCTTTCTGG CGCATGTACG GTATGGGATT ACCAGACGAG ATTCTGAAAA AAGTCTATTA CAAAAACGCC CTTCGGATCG TGCCCGGCCT GGACAAGAGC CAGTTCCCCA AGTGA
|
Protein sequence | MRIFYLSAFL LTGLLACGQS KPSQPDMPLG FEEYDPVSTL KVPEHKLTRS KFPFIDVHNH QWDMDKANLK PLLAQMDSLN MGIMINLSGR GWGSVAQGTQ FFDNAMANAA KASPKRLALF TNLNFDEIGR KGWTEDAVKL LEEDVKKGAR GLKIFKNLGL NNKDVSGQRV RVDDPRLDPI WAKCGELGIP VLIHTADPKS FWDPMDRYNE RWLELKLHGG RKRSANDPIP WDKLIAEQHN VFRKHPKTTF IAAHMGWYPN DLNKLDSLMT VFPNMNVEIG AVIAELGRQP RASRKFFEKY QDRILFGKDS WVPSEYATYF RVLETEDEYF PYHKKYHAFW RMYGMGLPDE ILKKVYYKNA LRIVPGLDKS QFPK
|
| |