| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0005 |
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| Symbol | |
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| ID | 8723733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4301 |
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| End bp | 6628 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_003384878 |
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| Protein GI | 284034948 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000710623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAAGA CGTCTACTTT ACTCAACAAG GCACTTTTAT GTCGTCTGCT GGCTACTTGT
CTATGGCTAC TAACTCCGGT GTATCTATGG GGGCAAACTG TTTACGTTAC CCCCGCCGGA
GCGGGGCAGC AAACCGGTGC CGACTGGGCC AATGCGTTAC CGGGTTCAGC CTTACAGGCT
CAGTTGGCCA GCGCATCGGC GGGTACCGTA TTTCGCCTGG CCGGAGGCCT GTATAAACCC
ACAATGACGA GTGATCGCTC TATCTCGTTT AGTATTCCCT CGGGTGTACA GGTGTACGGG
GGCTATGTGG GCAGCGGTTC CACCCCCGAT CAGCGGGTCG ACTTCGCCAC CAGCGATCAG
CCCAGCAGTA CCACCCTTTC TGGTGATATC GACAACGACA ATCAACTCGA TGCCGACAAT
ACCAACAATG TGGTTCGGTT TAGTAAGGTT AATGAGCAGA CTCGCCTGGA CGGGGTTGTT
GTTGCAGGAG GGTATGCTAA CCAGCCGTTA GCGAATCCAG AACTGTTCAA CTCATTCATT
GGTGGGGGAG GTATTTATAA TGATGCTTAT CGTGGTACCA GCAGCCCGAC TCTTGAAAAC
TGTTCGCTGA GTGGTAATTA CAGTTCCGGT AAGGGAGGAG GACTATTCAA TGATAACCGA
TCTGGTTCAG CCAATCTTAA ATTGCTCAAT ACGGATTTTA TCAACAATTC AGCCGCTCTT
GGCGGGGCTA TCTACCAGTA TGTTAGTTCG CCAAGTGGCG ATTTTATTCC CTTCTTTACC
AACTGTCGTT TCGTGGGCAA TTCGGCCGGA TCGGGTGGGG CCGTCTACAC GGATGTTACC
ATTGAGTTCA GCGGTTCTCC AACGCTTACT TCTACGTACA TCAATTGCAG CTTTGTCGGG
AATACGGCTA CGAGCCGGGG GGGCGCCATG TACAACGATG CCCGGGGAAC AACGTCTCTC
CAGACTCTGT CTACCTTAAT CAACTGTACG CTGAGCGACA ATACTGCCCC TGTGGGGGGC
GCATTTCTGA ATACCGCAAC GCCACTTTTC ACCCGGTTTG TTCTTGTCGT AAGCCAGGTT
AACCTAACCA ATTGTATCCT TTGGAACAAC GGTGGCACGA ATGCTGTCGT TAACGAAACG
TACAGCCCGC CATCTGGCGT AACCAGTGGT GGCCAGGGAC GTACTGTGTC AACAACTAGT
GTTCTGGAAG CAGGTGTTGT GCTTACCAGC GGCAGTGCCA ACCAATTTAT TACTGTTTCA
CCCTTCGTGA GTGAGGGAAG CCTGCAACTG TCTCCTTGTT CACCAGCGGT CAATACAGGC
CTGAACTCAG CTTACACCAG TGCAAATGGT CCGGCTACTG ATCTGGCGGG TAATCCCCGC
CTGTTTCCTG CCGGGGGTAC GATTGATGCT GGTGCCTACG AATTGCAGCA GACCAGCGCA
ACACCAATTG CAATCACCCA GCAGCCAGTG AGTCAGTCCA GCGTGCAGGC CGGGGCTACC
GTGGTGGTAA CAGTAGGGCT AAGCGGCCCG GCTACGAGCT ATGCCTGGTA TAAAGATGGT
GTGCTGGTAA CAGGTCAGGA ATCTGCTACG CTTACGCTGA CAAATGTGCA GCCTATTCAG
TCGGGTTCGT ATCAGTTGGT GGCCGTAACC CCATGCAACA GTGTAACGTC GAGTGGATTT
AGCTTAGTTG TGACGCCGAT GGTGTCTAAT CCGCTTGTAA GTTCATTGAC TGCCACAATA
TTGAGTCTAT GTGCTGGTAG CCAGACGCAG CTTACAGCAC AAGCCAGCGG AGGCACAGCG
ACTTACACCT ATTCGTGGTA TTTCACTGGT GATGCTATTC TAAGTAACGC TGTTAACAAT
ACCATTCAAC TTCGGGCGAA CACGGCTCAG GTGCTTTCGG TAAGCGTAGT AGTTACCGAT
GCGACGGGGG CGACCAGTAG CGCGAGCCTG GCCATTACCA TAAACAGCCT TCCCAATGCT
TCGTTTACCG GCTTACCCGC CAGCCTATGT CAGGAGGCTG CTCCCGTTAA CCTTACCGCC
AGTACACCGG GTGGTAGCTT CGCGGGGGTT GGTGTAGAGG GCAGTACGTT CTACCCCGGT
CGTATTCAGG CGGGTGGACC GTATACGATT ACGTATTCAG TTACCAGCCA GGGCTGTTCC
AGTACGTCTA CGCAAAGCAT TAGTGTGCTG TCGGCACCTG CCGCCCCCAG TCTCGTTACC
CTGAATGGTC AACTTTATGC CGGTAATCAG TCTCGGGCGG AGGTGCCACA GTATTCCGGA
ACAGTAACGT TGGTGAGCAG TGGGTGTTCC GGTGGCACAA TCAGCTGA
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| Protein sequence | MVKTSTLLNK ALLCRLLATC LWLLTPVYLW GQTVYVTPAG AGQQTGADWA NALPGSALQA
QLASASAGTV FRLAGGLYKP TMTSDRSISF SIPSGVQVYG GYVGSGSTPD QRVDFATSDQ
PSSTTLSGDI DNDNQLDADN TNNVVRFSKV NEQTRLDGVV VAGGYANQPL ANPELFNSFI
GGGGIYNDAY RGTSSPTLEN CSLSGNYSSG KGGGLFNDNR SGSANLKLLN TDFINNSAAL
GGAIYQYVSS PSGDFIPFFT NCRFVGNSAG SGGAVYTDVT IEFSGSPTLT STYINCSFVG
NTATSRGGAM YNDARGTTSL QTLSTLINCT LSDNTAPVGG AFLNTATPLF TRFVLVVSQV
NLTNCILWNN GGTNAVVNET YSPPSGVTSG GQGRTVSTTS VLEAGVVLTS GSANQFITVS
PFVSEGSLQL SPCSPAVNTG LNSAYTSANG PATDLAGNPR LFPAGGTIDA GAYELQQTSA
TPIAITQQPV SQSSVQAGAT VVVTVGLSGP ATSYAWYKDG VLVTGQESAT LTLTNVQPIQ
SGSYQLVAVT PCNSVTSSGF SLVVTPMVSN PLVSSLTATI LSLCAGSQTQ LTAQASGGTA
TYTYSWYFTG DAILSNAVNN TIQLRANTAQ VLSVSVVVTD ATGATSSASL AITINSLPNA
SFTGLPASLC QEAAPVNLTA STPGGSFAGV GVEGSTFYPG RIQAGGPYTI TYSVTSQGCS
STSTQSISVL SAPAAPSLVT LNGQLYAGNQ SRAEVPQYSG TVTLVSSGCS GGTIS
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