Gene HMPREF0424_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_1333 
Symbol 
ID8709404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand- 
Start bp1594795 
End bp1595763 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content45% 
IMG OID646483418 
Product2-dehydropantoate 2-reductase 
Protein accessionYP_003374516 
Protein GI283783762 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1893] Ketopantoate reductase 
TIGRFAM ID[TIGR00745] 2-dehydropantoate 2-reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.782684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCA TGAAATATGC AATGATCGGT TCGGGAGCTA TGGGATATCG CTATGGCGTT 
TTGTTGCAGG AAACGGCTGG CATTCATGTT GATTTCATTG ATGCCTGGGA TGAGAATGTG 
AATAAAGTTC GCGAGCAAGG CGGCGTAATG GTGAGCCGTG ACCATGAAAA CCGTCATTTG 
GTGCCGATTA ATATGTATAC GCCTGAAGAT TATGACGGCG ATCCAGACGT GTGGATTGTG 
TTTATGAAGC AAATGCAGCT TGCGGAAATG TTGGAGCGTT GTAAGCATCT GTTTAAAGAG 
CATCAGGTTG TGTTTGCTGC TATGAATGGC TGGGGTCATT TTGAAAAGTT GCAGCAGTAC 
TTCCCGGATG ATCATATTTA CGGCGGAACT GCCATGATTG CAACCGTTTT GAACGGTCCA 
GGCGACGTTG ATTTTATTGG TAAAGTTGGC GTTGGAACTA TGAATATGTG CGCGTTGAAC 
GAGCAGGTGA GTGACGTTGA GCTTGCTATG CGAGACGACT TTAAAGCTGC CGGATTGAAT 
CCTACTATTA CGGAAGATTT CAAGGGTACG TGCATGGCGA AGGTAGTTTT CAATTCCGTA 
GTTAACACTT TGTGCACAAT GTATCAGATT CAAATGGGTC AGTTTATTTC GTACCCTGGG 
GCTATGGATA TGGCTCAACA GCTTATTAAC GAAGCGTACG ACGTGTGCGA TCGTGCCGGA 
ATTCGTATGG TTAATACGCG TCAGCAGGAG CTAGAGGCTA TCGATTACGT AAGTCGCGTT 
GCAAATCCTC TGCACTATCC TTCTATGTAC CAAGATATGA GTCGCGGACG AAAGACTGAA 
GTCGATTACA TTAATGGTTA CATAGCAAAG CTCGGTCGCG AAAATGATTA CGTTTGCCGC 
ACTCACGAAT TCTTAACTCA CGGCGTACAC TTAGCGGAAC TTGCTTTTAA ATTGCACCAT 
CAGCAATGA
 
Protein sequence
MSGMKYAMIG SGAMGYRYGV LLQETAGIHV DFIDAWDENV NKVREQGGVM VSRDHENRHL 
VPINMYTPED YDGDPDVWIV FMKQMQLAEM LERCKHLFKE HQVVFAAMNG WGHFEKLQQY 
FPDDHIYGGT AMIATVLNGP GDVDFIGKVG VGTMNMCALN EQVSDVELAM RDDFKAAGLN 
PTITEDFKGT CMAKVVFNSV VNTLCTMYQI QMGQFISYPG AMDMAQQLIN EAYDVCDRAG 
IRMVNTRQQE LEAIDYVSRV ANPLHYPSMY QDMSRGRKTE VDYINGYIAK LGRENDYVCR 
THEFLTHGVH LAELAFKLHH QQ