| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1326 |
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| Symbol | |
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| ID | 8709168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1583405 |
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| End bp | 1584742 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 646483411 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374512 |
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| Protein GI | 283783758 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATGA TTTTCAATCG TCAAAGTTAC ATAAGGAAAC TTAACCAGCT TAGTTGGAAT
GGTCTGGTTA AAATCATTAC TGGTGTGCGC CGCGCGGGAA AGTCGTTCAT TCTTAACGAG
CTGTTCTATA ATTCTCTTAT TTCTCAAGGT GTTTTGCAGA AGAATATTAT TCGGTTTGCC
TTTGATGCAG ACGAAGATAT TGATCGTCTT GAGCCATTCG CAAATGGCGA GCCAGTAAAA
ATCGCAGATA AAAAACTTGG CTACGTTATA AATGCTAAAG TGTTCCGTCG CTACATTGCG
TCGCAAATAA ATGATAGTGA CAAGTTTTAC ATTTTCCTCG ACGAAGTGCA ATTGCTTGAT
AATTTTGTTG GTACACTTAA CAGTTACTTA AGGCACGCAA ATTTAGACAT ATATGTTACT
GGATCTAACT CCCGTTTTCT TTCATCAGAC ATTGTTACTG AATTTAAGGG GAGGAGCACA
GAAGTTCACG TCCAACCCCT TACTTTTGCC GAATATGTGG AAAGTTCTAA CAAAACGGTT
TCAGAATCTT GGGCAGATTA CATTGTTACT GGCGGAATAC CGCTTGTAGC TAGAATGCAA
AATGTTGAGG AACAAATAAA CTACCTTGAA AATCTTGTTA AAGAAACTTA TTTGAAAGAT
GTAGTTCAGC GAAACGGCGT GCGAAAAGAA CAGGCTCTTT CTGAAACTTT GCAAGTAATA
GCTTCATCAA TAGGCGCTCC TGTTAATCCA AGGAAACTTT CTAACACGTT TATTAGCCAC
GGATATGGGG AAATTACTTC AGCAACTGTT AGTCGTTTCA TAGACTACTA CAGCGATGCT
TTTCTTGTAA GCAAAGCTCA AAAGTACAAT ATTAAGGGCA AAAAATACAT TGATTCCTTG
TTCAAAATTT ACTTTGAAGA CATTGGTGTA CGCAACGCTT TACTTAATTT TAGGCAAATT
GAAGAGTCGC ATATTATGGA AAATGTTATA TACAACGAAT TAAGATATCG CGGATATAAC
GTGGATATTG GCGAAATGAA TATTGCCGAA AATACTGGTC GAAAAGATAA AAATAACCAT
GATATTTATG CGCAAAAATC TTTGGAAATA GATTTTATTG CTACTTTGGG AAGTGAAAAA
TATTATATAC AATCTGCGCC CGCTATGCCA ACGGAAGAAA AATCATTGCG AGAGAAACGC
TCGCTTTACT ATATTGATAA TTCCTTCAAA AAGATAGTAG TTACGAAAAA TGGATTGCAT
GCTACAAGAG ATAATCGTGG GGTAGTCACC ATGGACCTAT TTGATTTTTT GCTTAACGAG
GATAGTCTTA AGCGGTGA
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| Protein sequence | MRMIFNRQSY IRKLNQLSWN GLVKIITGVR RAGKSFILNE LFYNSLISQG VLQKNIIRFA
FDADEDIDRL EPFANGEPVK IADKKLGYVI NAKVFRRYIA SQINDSDKFY IFLDEVQLLD
NFVGTLNSYL RHANLDIYVT GSNSRFLSSD IVTEFKGRST EVHVQPLTFA EYVESSNKTV
SESWADYIVT GGIPLVARMQ NVEEQINYLE NLVKETYLKD VVQRNGVRKE QALSETLQVI
ASSIGAPVNP RKLSNTFISH GYGEITSATV SRFIDYYSDA FLVSKAQKYN IKGKKYIDSL
FKIYFEDIGV RNALLNFRQI EESHIMENVI YNELRYRGYN VDIGEMNIAE NTGRKDKNNH
DIYAQKSLEI DFIATLGSEK YYIQSAPAMP TEEKSLREKR SLYYIDNSFK KIVVTKNGLH
ATRDNRGVVT MDLFDFLLNE DSLKR
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