| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1322 |
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| Symbol | |
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| ID | 8709305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1579637 |
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| End bp | 1580539 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646483407 |
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| Product | putative lipoprotein |
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| Protein accession | YP_003374508 |
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| Protein GI | 283783754 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGT TTACGAAAGT ATTCTTGTTA GCTGCTCTGC CAGCGTGTTT GCTTACTGCA
TGCGCTGGTA GAGCAGTTGA TGATAGTCAA CAGCAGGCAT CGCATGATTC AGTTCCACTT
ATTTCAGTCA AAAAACAGCC TTTAACACAA GTTGTGTCGG GTAAAGCAAC AATAGAACAA
TCGTCTACCT TTGTTATCAC TGCTGTAAGT AGAGGGAATT TTTCTCCATC GGTAAAAGCA
GGAAGTGCTG TAAAAGCTGG AAGTATTTTA GGCTACAATG CTGATAACAA AGTTATTGCT
CCAGTAGACG CTAAAGTTGT GTCAGTGGCT GAATCATCTG CGGACGTGCC TAAATCTTTC
CCGCTATTTA CTCTTAAATA TGAAGGTTTT TCAATAAGCC TTAACGCAAA AGCTTTACTT
CGTTCTGCGG ATATTGCAGA TATTAAAGGT CGCTTCCAAG TTGAAGATGG TGTTGGGCCA
ACCAATTGTT TGCAAATAGT ACAAAGCGGT GGAACTTCTA CAGATGTTGC AGCTTCGGGT
AGTAGCAAGA ATGATAATGC TGATTCAACT CAAACAGATG AGTCGAGTGC GCAAAGTACG
CCTAGTGTAT CGTCAAAAGT TTTAACGTGT TTAATAGATA AAAGCACAGA AGTAGAATCA
GGCCAAAATG CGACGCTTGT TTTTAATGGC AAGCATAAAC AATCGGTTCT AACTCTGCCT
GTTAGTGCAG TTGCTGGAAG AGTCCAAAAA GGATTAGTCT CATACAAGAA AGGCGATAAT
TGGGAGCGTA AAGAAGTTGG TCTTGGAATC AGTGACGGCG CTAATATTGA AATTACGTCT
GGTTTGCATG AGGGTGATGT TGTAGCAGGT GTTTCTCCTG ATCTCATTCC AGGAGTGCAA
TGA
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| Protein sequence | MRKFTKVFLL AALPACLLTA CAGRAVDDSQ QQASHDSVPL ISVKKQPLTQ VVSGKATIEQ
SSTFVITAVS RGNFSPSVKA GSAVKAGSIL GYNADNKVIA PVDAKVVSVA ESSADVPKSF
PLFTLKYEGF SISLNAKALL RSADIADIKG RFQVEDGVGP TNCLQIVQSG GTSTDVAASG
SSKNDNADST QTDESSAQST PSVSSKVLTC LIDKSTEVES GQNATLVFNG KHKQSVLTLP
VSAVAGRVQK GLVSYKKGDN WERKEVGLGI SDGANIEITS GLHEGDVVAG VSPDLIPGVQ
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