| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1299 |
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| Symbol | malQ_2 |
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| ID | 8709746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1553648 |
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| End bp | 1555897 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646483386 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_003374487 |
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| Protein GI | 283783733 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA CAGCTACTGG CAAAGCTGAT GCTGATAAGC CTATGGAAGA AAGCGCAGAA
CGTCTTGCAC GTCCACTTAT TAAGCTTGCT AAGGCGTGCG GCGTTGCCAC TTTTTATATT
GATCAGCAAG GAAGCTACAC CGAAATTACA GATGAAGCAT TAGTTGGAGT ACTTGATGCA
TTAGGCATGC CTGCCGACAC TCAAGACAAT ATTGCAATTT CATACGAGAA GGTTCAGCGC
AAACGCTCTA GCGAGTTATT GCCACCAACT GTCGTTTCGT TTAATGGCGC AAAAACTTGC
GTACCAATTC ACGCAGGAGA TGCCAAAAAA GAGCAAATTC ACATTTCTCT TACACTCGAA
GATGGAACAG ATTATGAAGA CTCGTTAGGC GATATTCAAT CCGAAGACGA TGGAGACTTG
TTCATTGAAC TTCCGGATGA TTTGCCAATG GGCTACCACA CTTTGCATGC CAAAGTAATC
AGCGCGAATG GCGAGACGGC TCAACATGCT GATGCCACAT TGATTGCCGC ACCTGCGCGT
ATTCCATTGC CTGAAAGCGT TAAGCAAAAG CACCGTTGGG GATTCATGAC GCAAATGTAT
TCTGTGCGTT CAAAAGATTC TTGGGGAATT GGCGATTATG GCGATTTGCG TCGCCTACTT
AAGGATGCTG GAGAAATCGG CAAGGCTGAT TTTATGCTGA TTAATCCAAT TCATGCGTGC
GCTCCAGTAA CACCTCTTGA GCCTTCACCG TACTTGCCTG AGTCTCGTAG GTTCTTGAAT
GTCACTTATA TTCGTCCGCA AGATATTCCG GAATATGCTG AATTAAGTGG CGAAGATCTT
GCTAAAGTAG AGCAATTGCA TGAGTCTATT GCTCCTCAAA ACAATAATCC AAATCCTATA
GATATCAACG CTGCATGGGA TGCCAAGCTT CCTGCGTTGC GTATTATTTT CAAGCAACCT
CGTTCTACCG AGCGCGAGCG CGAGTTTAGT GAGTTTAAGC ATCGTTCTGG TGAAGATCTT
GACGCCTTTG CAACTTGGTG TGTTGCGTTT GAGGTTTGGG GCGCTCCTTG GGGCGAGAAT
TTGTGGTTTG ACACTACAGG CAAAGGCACT CCGCAAATTG AGCGACTTAA GCGCGAACAT
GCTGACTTGT TTGAGTTCCA TCGTTGGCTT CAGTGGATTG CTGATGAGCA AGTTGCTGCA
GCTCACGCTG AAGCTAAAGC TGCTGGTATG GCAATTGGTC TTATGCAAGA CATGGCAGTT
GGCGTACACG GCTACGGTGC TGACGTTTGG TGGAGTCCGG AACGATTTGC TAATGGTGTA
AGCGTCGGTG CTCCTCCTGA TTTCTACAAC CAGCAAGGTC AGGATTGGGG TCAACCTCCA
TTCGATCCAA ATTATTTGGA TGAAACTGGC TATATTGCTT ACCGAGACAT GGTTCATAAC
GTGTTCTTGC ATGCAGGAGC TGCTCGTATT GATCACGTTC TTGGATTGTT CCGCTTATGG
TGGATTCCAC AAGGACAGGG TGCTAGAAAC GGCGCGTATG TGTACTACAA CGTAGATGCA
ATGCTCGCAG TTCTCACTAT TGAAGCAACT CGCGCAGGCG GTGTTGTTAT TGGCGAAGAT
TTGGGCACTG TGCCGAAGTA TGTTTCTAAG GTTCTTGCAT CTCATGGCGT GCTTGGCACT
GTTGTTGAGT GGTTCACCCA CGACGACGAA GCTGAAGCCA CTACTAAGAA GGCTGGAAAG
AAGCAAATTA TTTTTGCTAA TCCGTCTACA TATCGAGAGT ATGCTCTTGC TTCCGTTACT
ACGCACGATA TGCCACCTAC AGCTGGTTAT CTTGCCTTTG AGCATGTCAA GCTTCGCGAG
CAACTTCATC TGCTTACAGA CTCCGTAGAA ACGTTCCAGG AGGCTGCTCA AGCTGAACGC
GATGCAATGA TGAAGATGCT TCTTGAGAAC GGTTGGATTA GCAAAGATGC TGCTGAGGAT
GTTGAAGGTC ATGTACAAGA GATTGTGGAA GCTATGCATG CAATTATGCT CACTTCCCCA
TCTTTGCTTT TGCAAGTAGC TTTGGTTGAT GCTGTCGGCG AGAAGCGTTC ACAGAATCAG
CCTGGAACTA GTACAGAGTA TCCAAACTGG CGTATTCCAC TTGCTGATGC TGATGGTCGT
GTAGTTCACA CCGATGAAGT ATTTAAGTCA CCACGAGTGC TATCTATGAC GGCAGTTATG
CGCGGCGAAA ATACACGGAA GCATGTATAA
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| Protein sequence | MTTTATGKAD ADKPMEESAE RLARPLIKLA KACGVATFYI DQQGSYTEIT DEALVGVLDA
LGMPADTQDN IAISYEKVQR KRSSELLPPT VVSFNGAKTC VPIHAGDAKK EQIHISLTLE
DGTDYEDSLG DIQSEDDGDL FIELPDDLPM GYHTLHAKVI SANGETAQHA DATLIAAPAR
IPLPESVKQK HRWGFMTQMY SVRSKDSWGI GDYGDLRRLL KDAGEIGKAD FMLINPIHAC
APVTPLEPSP YLPESRRFLN VTYIRPQDIP EYAELSGEDL AKVEQLHESI APQNNNPNPI
DINAAWDAKL PALRIIFKQP RSTEREREFS EFKHRSGEDL DAFATWCVAF EVWGAPWGEN
LWFDTTGKGT PQIERLKREH ADLFEFHRWL QWIADEQVAA AHAEAKAAGM AIGLMQDMAV
GVHGYGADVW WSPERFANGV SVGAPPDFYN QQGQDWGQPP FDPNYLDETG YIAYRDMVHN
VFLHAGAARI DHVLGLFRLW WIPQGQGARN GAYVYYNVDA MLAVLTIEAT RAGGVVIGED
LGTVPKYVSK VLASHGVLGT VVEWFTHDDE AEATTKKAGK KQIIFANPST YREYALASVT
THDMPPTAGY LAFEHVKLRE QLHLLTDSVE TFQEAAQAER DAMMKMLLEN GWISKDAAED
VEGHVQEIVE AMHAIMLTSP SLLLQVALVD AVGEKRSQNQ PGTSTEYPNW RIPLADADGR
VVHTDEVFKS PRVLSMTAVM RGENTRKHV
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