| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1281 |
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| Symbol | grpE |
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| ID | 8708760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1530493 |
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| End bp | 1531191 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646483369 |
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| Product | co-chaperone GrpE |
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| Protein accession | YP_003374470 |
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| Protein GI | 283783716 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGACT TTAACGCCAA CGAATATTTG CAAGATATGG AAGATGCTGA CTCGCTGGGT
GTAAAAGCTA CAGGTGATTC TGCGAAATCG TCTGCGCAAT CTTCATCGAA AGCTGCTGAA
GATGCAAATC CTGCAGAAAC GAAAGCTGAT GCACAAGCTG ATGCTAACGT TTCTGCGGAT
TCCGCAAATT CTGAGGATAC AGCGAATTCC ACTGAATCCT CAGAATCGAA AGACAGCCAA
GACGCGGATA GCGGCAGTTT AACTCCCTTA GGTAAAGCTA AGAAAGAAGC TGCAGAGTAC
TTGGAAGCGT TACAGCGAGA GCGTGCTGAG TTTATAAACT TCAGAAATCG TTCTGCCAAA
GAGCAGGATC GTTTCAGACA GCATGGAATT ATTGACGTGC TGACAGCATT GCTTCCGGCA
TTGGATGACA TTGACCGCAT TCGCGAGCAT AGCGAAATGG ATGATTCATT CAAGGCTGTT
GCAACTAAGA TAGATAAAGC TTTTGAAAAG TTTGGTGTGG AAAAGTTTGG TGAGAAGGGC
GAAGATTTTG ACCCGACCAA GCATGATGCA ATTTTGCACA GGCCAGATCC AGACGCTACA
AAAGAAACTG TTGATGCTGT AGTTGAAGCA GGATATCGAA TAGGAGATCG CGTTATTCGC
GCCGCTCGTG TGGTCGTTTC TTCGCCAAGT AATGACTAA
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| Protein sequence | MSDFNANEYL QDMEDADSLG VKATGDSAKS SAQSSSKAAE DANPAETKAD AQADANVSAD
SANSEDTANS TESSESKDSQ DADSGSLTPL GKAKKEAAEY LEALQRERAE FINFRNRSAK
EQDRFRQHGI IDVLTALLPA LDDIDRIREH SEMDDSFKAV ATKIDKAFEK FGVEKFGEKG
EDFDPTKHDA ILHRPDPDAT KETVDAVVEA GYRIGDRVIR AARVVVSSPS ND
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